Brain Lower Grade Glioma_LGG_TCGA-DU-7009-01A-11R-2027-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

185 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-7009-01A-11R-2027-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCE1 ATP-binding cassette, sub-family E (OABP), member 1
ADGRB3 adhesion G protein-coupled receptor B3
AFAP1 actin filament associated protein 1
AGFG1 ArfGAP with FG repeats 1
AKAP6 A kinase (PRKA) anchor protein 6
ANGPTL2 angiopoietin-like 2
ANKRD31 ankyrin repeat domain 31
AP5M1 adaptor-related protein complex 5, mu 1 subunit
ASCC3 activating signal cointegrator 1 complex subunit 3
ATAD1 ATPase family, AAA domain containing 1
ATF2 activating transcription factor 2
ATF7 activating transcription factor 7
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
BCHE butyrylcholinesterase
BRWD3 bromodomain and WD repeat domain containing 3
C2ORF49 chromosome 2 open reading frame 49
C4ORF45 chromosome 4 open reading frame 45
CA8 carbonic anhydrase VIII
CADM2 cell adhesion molecule 2
CASD1 CAS1 domain containing 1
CBLL1 Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase
CCDC185 coiled-coil domain containing 185
CCER1 coiled-coil glutamate-rich protein 1
CCSER2 coiled-coil serine-rich protein 2
CDC14C cell division cycle 14C
CELA2B chymotrypsin-like elastase family, member 2B
CFAP97 cilia and flagella associated protein 97
CLCN3 chloride channel, voltage-sensitive 3
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNOT4 CCR4-NOT transcription complex, subunit 4
CNTNAP5 contactin associated protein-like 5
COG5 component of oligomeric golgi complex 5
COL17A1 collagen, type XVII, alpha 1
COPS2 COP9 signalosome subunit 2
CSRNP3 cysteine-serine-rich nuclear protein 3
CTCF CCCTC-binding factor (zinc finger protein)
CTNNA3 catenin (cadherin-associated protein), alpha 3
CUX1 cut-like homeobox 1
CXXC4 CXXC finger protein 4
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DEFB109P1 defensin, beta 109, pseudogene 1
E2F5 E2F transcription factor 5, p130-binding
EXOC5 exocyst complex component 5
FAM133B family with sequence similarity 133, member B
FBXW11 F-box and WD repeat domain containing 11
GPR19 G protein-coupled receptor 19
GRID2 glutamate receptor, ionotropic, delta 2
GTF2A1 general transcription factor IIA, 1, 19/37kDa
HAPLN1 hyaluronan and proteoglycan link protein 1
HCG18 HLA complex group 18 (non-protein coding)
HDAC4 histone deacetylase 4
HELZ helicase with zinc finger
HSPA13 heat shock protein 70kDa family, member 13
HSPA1L heat shock 70kDa protein 1-like
IL1RAPL1 interleukin 1 receptor accessory protein-like 1
KCNH7 potassium channel, voltage gated eag related subfamily H, member 7
KCNIP2 Kv channel interacting protein 2
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KIAA2026 KIAA2026
KIF2A kinesin heavy chain member 2A
KLHDC10 kelch domain containing 10
KMT2E lysine (K)-specific methyltransferase 2E
LACE1 lactation elevated 1
LHFPL3 lipoma HMGIC fusion partner-like 3
LIN28A lin-28 homolog A (C. elegans)
LIPI lipase, member I
LOC284788 uncharacterized LOC284788
LRPPRC leucine-rich pentatricopeptide repeat containing
LRRC37A4P leucine rich repeat containing 37, member A4, pseudogene
LRRC58 leucine rich repeat containing 58
LRRN1 leucine rich repeat neuronal 1
LRRN3 leucine rich repeat neuronal 3
LRRTM4 leucine rich repeat transmembrane neuronal 4
MBD5 methyl-CpG binding domain protein 5
MESTIT1 MEST intronic transcript 1, antisense RNA
METTL2B methyltransferase like 2B
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MUT methylmalonyl CoA mutase
MYO10 myosin X
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D
NCAM2 neural cell adhesion molecule 2
NCKAP1 NCK-associated protein 1
NCOA6 nuclear receptor coactivator 6
NCOR1 nuclear receptor corepressor 1
NF1 neurofibromin 1
NFYA nuclear transcription factor Y, alpha
NIPBL Nipped-B homolog (Drosophila)
NLGN1 neuroligin 1
NOLC1 nucleolar and coiled-body phosphoprotein 1
NPAT nuclear protein, ataxia-telangiectasia locus
OPHN1 oligophrenin 1
OPN1SW opsin 1 (cone pigments), short-wave-sensitive
OR2L13 olfactory receptor, family 2, subfamily L, member 13
OR2M2 olfactory receptor, family 2, subfamily M, member 2
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR6B1 olfactory receptor, family 6, subfamily B, member 1
OR9A2 olfactory receptor, family 9, subfamily A, member 2
ORC4 origin recognition complex, subunit 4
PCDHA4 protocadherin alpha 4
PCDHA9 protocadherin alpha 9
PCDHB7 protocadherin beta 7
PCDHGB4 protocadherin gamma subfamily B, 4
PDLIM5 PDZ and LIM domain 5
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PDZD8 PDZ domain containing 8
PELI1 pellino E3 ubiquitin protein ligase 1
PLN phospholamban
POGLUT1 protein O-glucosyltransferase 1
PON1 paraoxonase 1
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP1R9A protein phosphatase 1, regulatory subunit 9A
PRELP proline/arginine-rich end leucine-rich repeat protein
PRICKLE1 prickle homolog 1 (Drosophila)
PRL prolactin
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PTPRT protein tyrosine phosphatase, receptor type, T
PUM2 pumilio RNA-binding family member 2
PUS7L pseudouridylate synthase 7 homolog (S. cerevisiae)-like
RAB2A RAB2A, member RAS oncogene family
RALGAPA1 Ral GTPase activating protein, alpha subunit 1 (catalytic)
RGPD8 RANBP2-like and GRIP domain containing 8
RNASE8 ribonuclease, RNase A family, 8
SCAMP1 secretory carrier membrane protein 1
SCARNA21 small Cajal body-specific RNA 21
SCN3A sodium channel, voltage gated, type III alpha subunit
SGCE sarcoglycan, epsilon
SLC11A2 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 2
SLC30A4 solute carrier family 30 (zinc transporter), member 4
SLC8A1 solute carrier family 8 (sodium/calcium exchanger), member 1
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SMEK2 SMEK homolog 2, suppressor of mek1 (Dictyostelium)
SNAPC3 small nuclear RNA activating complex, polypeptide 3, 50kDa
SOS1 son of sevenless homolog 1 (Drosophila)
SOS2 son of sevenless homolog 2 (Drosophila)
SRPK2 SRSF protein kinase 2
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STOX2 storkhead box 2
SUSD5 sushi domain containing 5
SYT14 synaptotagmin XIV
TAOK1 TAO kinase 1
TBC1D21 TBC1 domain family, member 21
TBCK TBC1 domain containing kinase
TBPL1 TBP-like 1
TCAIM T cell activation inhibitor, mitochondrial
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TET2 tet methylcytosine dioxygenase 2
TEX37 testis expressed 37
THAP5 THAP domain containing 5
TMEM192 transmembrane protein 192
TMEM87A transmembrane protein 87A
TMTC4 transmembrane and tetratricopeptide repeat containing 4
TRIM49 tripartite motif containing 49
TSSK1B testis-specific serine kinase 1B
TTBK2 tau tubulin kinase 2
TUBGCP4 tubulin, gamma complex associated protein 4
TXLNG taxilin gamma
UBE2H ubiquitin-conjugating enzyme E2H
UBXN7 UBX domain protein 7
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
USP17L6P ubiquitin specific peptidase 17-like family member 6, pseudogene
USP32 ubiquitin specific peptidase 32
USP49 ubiquitin specific peptidase 49
WASL Wiskott-Aldrich syndrome-like
WDFY3 WD repeat and FYVE domain containing 3
WDR12 WD repeat domain 12
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase
XPO7 exportin 7
ZC3H8 zinc finger CCCH-type containing 8
ZEB2 zinc finger E-box binding homeobox 2
ZFP91 ZFP91 zinc finger protein
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZKSCAN1 zinc finger with KRAB and SCAN domains 1
ZKSCAN7 zinc finger with KRAB and SCAN domains 7
ZMYM2 zinc finger, MYM-type 2
ZNF197 zinc finger protein 197
ZNF208 zinc finger protein 208
ZNF277 zinc finger protein 277
ZNF41 zinc finger protein 41
ZNF454 zinc finger protein 454
ZNF676 zinc finger protein 676
ZNF91 zinc finger protein 91
ZNF99 zinc finger protein 99
ZSCAN23 zinc finger and SCAN domain containing 23

low expression

Symbol Name
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19