Brain Lower Grade Glioma_LGG_TCGA-DU-7008-01A-11R-2027-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

234 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DU-7008-01A-11R-2027-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2
ACOXL acyl-CoA oxidase-like
ADGRG6 adhesion G protein-coupled receptor G6
AGAP3 ArfGAP with GTPase domain, ankyrin repeat and PH domain 3
AGBL3 ATP/GTP binding protein-like 3
AGK acylglycerol kinase
AKR1B1 aldo-keto reductase family 1, member B1 (aldose reductase)
AREL1 apoptosis resistant E3 ubiquitin protein ligase 1
ARHGAP12 Rho GTPase activating protein 12
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ASIC4 acid sensing (proton gated) ion channel family member 4
B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
B4GALT2 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 2
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BMP15 bone morphogenetic protein 15
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3
C2ORF80 chromosome 2 open reading frame 80
C7ORF55 chromosome 7 open reading frame 55
C7ORF73 chromosome 7 open reading frame 73
C9 complement component 9
CASD1 CAS1 domain containing 1
CASP2 caspase 2, apoptosis-related cysteine peptidase
CASP9 caspase 9, apoptosis-related cysteine peptidase
CD82 CD82 molecule
CDH13 cadherin 13
CDH7 cadherin 7, type 2
CDK14 cyclin-dependent kinase 14
CDK5 cyclin-dependent kinase 5
CEP41 centrosomal protein 41kDa
CHCHD3 coiled-coil-helix-coiled-coil-helix domain containing 3
CNOT4 CCR4-NOT transcription complex, subunit 4
CNTNAP2 contactin associated protein-like 2
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CUL1 cullin 1
DACH2 dachshund family transcription factor 2
DEFB134 defensin, beta 134
DLL3 delta-like 3 (Drosophila)
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DPP6 dipeptidyl-peptidase 6
DTD2 D-tyrosyl-tRNA deacylase 2 (putative)
ESYT2 extended synaptotagmin-like protein 2
EXOC4 exocyst complex component 4
EYS eyes shut homolog (Drosophila)
FAM110B family with sequence similarity 110, member B
FAM131B family with sequence similarity 131, member B
FAM133B family with sequence similarity 133, member B
FAM66A family with sequence similarity 66, member A
FAM69A family with sequence similarity 69, member A
FAM71D family with sequence similarity 71, member D
FAXC failed axon connections homolog (Drosophila)
FBXO45 F-box protein 45
FDXACB1 ferredoxin-fold anticodon binding domain containing 1
FGF12 fibroblast growth factor 12
FLRT3 fibronectin leucine rich transmembrane protein 3
FOXD4 forkhead box D4
FOXD4L1 forkhead box D4-like 1
FOXD4L3 forkhead box D4-like 3
FOXD4L6 forkhead box D4-like 6
GALNT11 polypeptide N-acetylgalactosaminyltransferase 11
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GCC1 GRIP and coiled-coil domain containing 1
GOLGA8EP golgin A8 family, member E, pseudogene
GPR153 G protein-coupled receptor 153
GPR45 G protein-coupled receptor 45
GRIA4 glutamate receptor, ionotropic, AMPA 4
GRIK3 glutamate receptor, ionotropic, kainate 3
GRIK5 glutamate receptor, ionotropic, kainate 5
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D
GUCA2B guanylate cyclase activator 2B (uroguanylin)
GUSBP1 glucuronidase, beta pseudogene 1
HIRA histone cell cycle regulator
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3
HNRNPUL1 heterogeneous nuclear ribonucleoprotein U-like 1
HSDL1 hydroxysteroid dehydrogenase like 1
IGFBPL1 insulin-like growth factor binding protein-like 1
IGLON5 IgLON family member 5
IQCF5 IQ motif containing F5
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCNJ1 potassium channel, inwardly rectifying subfamily J, member 1
KCNK2 potassium channel, two pore domain subfamily K, member 2
KCNMB2 potassium channel subfamily M regulatory beta subunit 2
KCNRG potassium channel regulator
KDM4A lysine (K)-specific demethylase 4A
KIAA0226 KIAA0226
KIAA1549 KIAA1549
KIF21B kinesin family member 21B
KLHL35 kelch-like family member 35
KLRC2 killer cell lectin-like receptor subfamily C, member 2
KMT2E lysine (K)-specific methyltransferase 2E
KRBA1 KRAB-A domain containing 1
KRT76 keratin 76, type II
KRTAP10-2 keratin associated protein 10-2
KRTAP5-6 keratin associated protein 5-6
LHFPL4 lipoma HMGIC fusion partner-like 4
LINC00051 long intergenic non-protein coding RNA 51
LINC00596 long intergenic non-protein coding RNA 596
LMBR1 limb development membrane protein 1
LOC728554 THO complex 3 pseudogene
LOC728743 zinc finger protein pseudogene
LPPR5 lipid phosphate phosphatase-related protein type 5
LRFN1 leucine rich repeat and fibronectin type III domain containing 1
LRRC4 leucine rich repeat containing 4
LRRC47 leucine rich repeat containing 47
LRRN3 leucine rich repeat neuronal 3
LSG1 large 60S subunit nuclear export GTPase 1
LUC7L2 LUC7-like 2 (S. cerevisiae)
LUZP6 leucine zipper protein 6
MAST2 microtubule associated serine/threonine kinase 2
MDH2 malate dehydrogenase 2, NAD (mitochondrial)
MEIS3 Meis homeobox 3
MESTIT1 MEST intronic transcript 1, antisense RNA
METTL2B methyltransferase like 2B
MKRN1 makorin ring finger protein 1
MKRN3 makorin ring finger protein 3
MOSPD3 motile sperm domain containing 3
MROH2B maestro heat-like repeat family member 2B
MRPS33 mitochondrial ribosomal protein S33
NCAPG2 non-SMC condensin II complex, subunit G2
NCBP2 nuclear cap binding protein subunit 2, 20kDa
NDST3 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3
NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5
NEURL1B neuralized E3 ubiquitin protein ligase 1B
NLRP13 NLR family, pyrin domain containing 13
NOVA1 neuro-oncological ventral antigen 1
NOX3 NADPH oxidase 3
NUB1 negative regulator of ubiquitin-like proteins 1
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
NXPH1 neurexophilin 1
OPA1 optic atrophy 1 (autosomal dominant)
OR11H12 olfactory receptor, family 11, subfamily H, member 12
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR6A2 olfactory receptor, family 6, subfamily A, member 2
OVCH1 ovochymase 1
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PARP11 poly (ADP-ribose) polymerase family, member 11
PARP6 poly (ADP-ribose) polymerase family, member 6
PAXIP1 PAX interacting (with transcription-activation domain) protein 1
PCDHA2 protocadherin alpha 2
PCDHA5 protocadherin alpha 5
PDZRN4 PDZ domain containing ring finger 4
PEG10 paternally expressed 10
PFN2 profilin 2
PHF23 PHD finger protein 23
PIGX phosphatidylinositol glycan anchor biosynthesis, class X
PKIA protein kinase (cAMP-dependent, catalytic) inhibitor alpha
PKNOX2 PBX/knotted 1 homeobox 2
POM121C POM121 transmembrane nucleoporin C
POU2AF1 POU class 2 associating factor 1
PPP1R2 protein phosphatase 1, regulatory (inhibitor) subunit 2
PPP1R2P3 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 3
PRR19 proline rich 19
PRSS35 protease, serine, 35
PSIP1 PC4 and SFRS1 interacting protein 1
PTCD1 pentatricopeptide repeat domain 1
PTCHD2 patched domain containing 2
PVRL1 poliovirus receptor-related 1 (herpesvirus entry mediator C)
PVRL3 poliovirus receptor-related 3
RBM15B RNA binding motif protein 15B
REEP1 receptor accessory protein 1
REPIN1 replication initiator 1
RFX7 regulatory factor X, 7
RGAG1 retrotransposon gag domain containing 1
RGPD1 RANBP2-like and GRIP domain containing 1
RHEB Ras homolog enriched in brain
RND3 Rho family GTPase 3
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RSPO3 R-spondin 3
SDCBP2 syndecan binding protein (syntenin) 2
SDR9C7 short chain dehydrogenase/reductase family 9C, member 7
SENP5 SUMO1/sentrin specific peptidase 5
SHD Src homology 2 domain containing transforming protein D
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC37A3 solute carrier family 37, member 3
SMARCD3 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3
SND1-IT1 SND1 intronic transcript 1
SORD sorbitol dehydrogenase
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPANXD SPANX family, member D
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SSBP1 single-stranded DNA binding protein 1, mitochondrial
SSTR5 somatostatin receptor 5
STAG3L2 stromal antigen 3-like 2 (pseudogene)
STRIP1 striatin interacting protein 1
SURF6 surfeit 6
TAAR5 trace amine associated receptor 5
TAPT1 transmembrane anterior posterior transformation 1
TAS2R38 taste receptor, type 2, member 38
TAS2R43 taste receptor, type 2, member 43
TBC1D13 TBC1 domain family, member 13
TBPL1 TBP-like 1
TCAF1 TRPM8 channel-associated factor 1
THAP5 THAP domain containing 5
TMEFF2 transmembrane protein with EGF-like and two follistatin-like domains 2
TMEM100 transmembrane protein 100
TNFRSF17 tumor necrosis factor receptor superfamily, member 17
TNFRSF21 tumor necrosis factor receptor superfamily, member 21
TNPO3 transportin 3
TOX3 TOX high mobility group box family member 3
TPI1P2 triosephosphate isomerase 1 pseudogene 2
TRIM24 tripartite motif containing 24
TSG1 tumor suppressor TSG1
TTPAL tocopherol (alpha) transfer protein-like
UBE2H ubiquitin-conjugating enzyme E2H
UBE2R2 ubiquitin-conjugating enzyme E2R 2
UBE3C ubiquitin protein ligase E3C
UBN2 ubinuclein 2
UPK2 uroplakin 2
VIPR2 vasoactive intestinal peptide receptor 2
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
WDR60 WD repeat domain 60
ZC3HC1 zinc finger, C3HC-type containing 1
ZNF212 zinc finger protein 212
ZNF282 zinc finger protein 282
ZNF286B zinc finger protein 286B
ZNF3 zinc finger protein 3
ZNF30 zinc finger protein 30
ZNF304 zinc finger protein 304
ZNF324 zinc finger protein 324
ZNF329 zinc finger protein 329
ZNF398 zinc finger protein 398
ZNF425 zinc finger protein 425
ZNF610 zinc finger protein 610
ZNF746 zinc finger protein 746
ZNF747 zinc finger protein 747
ZNF777 zinc finger protein 777
ZNF786 zinc finger protein 786
ZNF80 zinc finger protein 80
ZNF862 zinc finger protein 862
ZSCAN25 zinc finger and SCAN domain containing 25
ZSWIM5 zinc finger, SWIM-type containing 5

low expression

Symbol Name
ATP5G3 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit C3 (subunit 9)
GPR89A G protein-coupled receptor 89A
ZMYM5 zinc finger, MYM-type 5