Brain Lower Grade Glioma_LGG_TCGA-DH-A7US-01A-11R-A33Z-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

239 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DH-A7US-01A-11R-A33Z-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADGRA3 adhesion G protein-coupled receptor A3
AKAP17A A kinase (PRKA) anchor protein 17A
ALPL alkaline phosphatase, liver/bone/kidney
AMH anti-Mullerian hormone
AMT aminomethyltransferase
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANO8 anoctamin 8
APOC1P1 apolipoprotein C-I pseudogene 1
ATHL1 ATH1, acid trehalase-like 1 (yeast)
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BCYRN1 brain cytoplasmic RNA 1
C2ORF82 chromosome 2 open reading frame 82
C7ORF34 chromosome 7 open reading frame 34
C7ORF71 chromosome 7 open reading frame 71
C9ORF173 chromosome 9 open reading frame 173
CALN1 calneuron 1
CARNS1 carnosine synthase 1
CATSPER2P1 cation channel, sperm associated 2 pseudogene 1
CATSPER4 cation channel, sperm associated 4
CBS cystathionine-beta-synthase
CCDC154 coiled-coil domain containing 154
CD22 CD22 molecule
CD300LG CD300 molecule-like family member g
CERCAM cerebral endothelial cell adhesion molecule
CGB2 chorionic gonadotropin, beta polypeptide 2
CHST1 carbohydrate (keratan sulfate Gal-6) sulfotransferase 1
CLEC4F C-type lectin domain family 4, member F
CLRN2 clarin 2
CPA2 carboxypeptidase A2 (pancreatic)
CPNE5 copine V
CRYAA crystallin, alpha A
CSAD cysteine sulfinic acid decarboxylase
CST5 cystatin D
CX3CL1 chemokine (C-X3-C motif) ligand 1
CYP17A1 cytochrome P450, family 17, subfamily A, polypeptide 1
CYP3A7 cytochrome P450, family 3, subfamily A, polypeptide 7
DAND5 DAN domain family member 5, BMP antagonist
DDR1 discoidin domain receptor tyrosine kinase 1
DGCR6 DiGeorge syndrome critical region gene 6
DGKD diacylglycerol kinase, delta 130kDa
DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1
DKK4 dickkopf WNT signaling pathway inhibitor 4
DNASE1L2 deoxyribonuclease I-like 2
DPPA5 developmental pluripotency associated 5
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
ENGASE endo-beta-N-acetylglucosaminidase
ENOSF1 enolase superfamily member 1
EPOR erythropoietin receptor
ESPNP espin pseudogene
FA2H fatty acid 2-hydroxylase
FADS1 fatty acid desaturase 1
FADS2 fatty acid desaturase 2
FAM182A family with sequence similarity 182, member A
FAM46D family with sequence similarity 46, member D
FAM86B1 family with sequence similarity 86, member B1
FCHO1 FCH domain only 1
FDXR ferredoxin reductase
FER1L5 fer-1-like family member 5
FHDC1 FH2 domain containing 1
FMO6P flavin containing monooxygenase 6 pseudogene
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOLH1B folate hydrolase 1B
GATA5 GATA binding protein 5
GDF1 growth differentiation factor 1
GINS3 GINS complex subunit 3 (Psf3 homolog)
GPR27 G protein-coupled receptor 27
GPR89B G protein-coupled receptor 89B
GPRC5C G protein-coupled receptor, class C, group 5, member C
GRID1 glutamate receptor, ionotropic, delta 1
GUSBP2 glucuronidase, beta pseudogene 2
H1FNT H1 histone family, member N, testis-specific
H1FX-AS1 H1FX antisense RNA 1
HDAC4 histone deacetylase 4
HEY2 hes-related family bHLH transcription factor with YRPW motif 2
HSF4 heat shock transcription factor 4
HSPA1L heat shock 70kDa protein 1-like
HSPB9 heat shock protein, alpha-crystallin-related, B9
IAPP islet amyloid polypeptide
IDUA iduronidase, alpha-L-
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL12A interleukin 12A
INPP1 inositol polyphosphate-1-phosphatase
INTU inturned planar cell polarity protein
JAKMIP3 Janus kinase and microtubule interacting protein 3
JMJD7-PLA2G4B JMJD7-PLA2G4B readthrough
KAT2A K(lysine) acetyltransferase 2A
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KIF21B kinesin family member 21B
KIF25 kinesin family member 25
KIF6 kinesin family member 6
KLF1 Kruppel-like factor 1 (erythroid)
KLK12 kallikrein-related peptidase 12
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KLK4 kallikrein-related peptidase 4
KRTAP5-7 keratin associated protein 5-7
KRTCAP3 keratinocyte associated protein 3
KSR1 kinase suppressor of ras 1
LCAT lecithin-cholesterol acyltransferase
LCE5A late cornified envelope 5A
LHX3 LIM homeobox 3
LHX5 LIM homeobox 5
LINC00032 long intergenic non-protein coding RNA 32
LINC00173 long intergenic non-protein coding RNA 173
LINC00176 long intergenic non-protein coding RNA 176
LINC01599 long intergenic non-protein coding RNA 1599
LOC100128076 protein tyrosine phosphatase pseudogene
LOC100271832 uncharacterized LOC100271832
LOC100272216 uncharacterized LOC100272216
LOC100272217 uncharacterized LOC100272217
LOC145474 uncharacterized LOC145474
LOC642929 general transcription factor II, i pseudogene
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC37A leucine rich repeat containing 37A
MAMDC4 MAM domain containing 4
METAP1D methionyl aminopeptidase type 1D (mitochondrial)
MRI1 methylthioribose-1-phosphate isomerase 1
MST1 macrophage stimulating 1
MYOD1 myogenic differentiation 1
NAP1L6 nucleosome assembly protein 1-like 6
NEB nebulin
NEURL3 neuralized E3 ubiquitin protein ligase 3
NLRP13 NLR family, pyrin domain containing 13
NMRK2 nicotinamide riboside kinase 2
NOTUM notum pectinacetylesterase homolog (Drosophila)
NRARP NOTCH-regulated ankyrin repeat protein
NUDT13 nudix (nucleoside diphosphate linked moiety X)-type motif 13
NXF4 nuclear RNA export factor 4 pseudogene
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2A5 olfactory receptor, family 2, subfamily A, member 5
OR2F1 olfactory receptor, family 2, subfamily F, member 1 (gene/pseudogene)
OR52A4P olfactory receptor, family 52, subfamily A, member 4, pseudogene
OR52D1 olfactory receptor, family 52, subfamily D, member 1
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR56B1 olfactory receptor, family 56, subfamily B, member 1
OSGEP O-sialoglycoprotein endopeptidase
OTOP1 otopetrin 1
PCAT4 prostate cancer associated transcript 4 (non-protein coding)
PCDHB15 protocadherin beta 15
PCDHB8 protocadherin beta 8
PCDHGB6 protocadherin gamma subfamily B, 6
PCDHGB7 protocadherin gamma subfamily B, 7
PCSK4 proprotein convertase subtilisin/kexin type 4
PCSK6 proprotein convertase subtilisin/kexin type 6
PKD1L3 polycystic kidney disease 1-like 3
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLGLB2 plasminogen-like B2
PLXNB3 plexin B3
PMS2CL PMS2 C-terminal like pseudogene
PON1 paraoxonase 1
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PPP1R2P1 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 1
PRKY protein kinase, Y-linked, pseudogene
RASL10A RAS-like, family 10, member A
REC114 REC114 meiotic recombination protein
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RGS9 regulator of G-protein signaling 9
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RRH retinal pigment epithelium-derived rhodopsin homolog
RUSC1-AS1 RUSC1 antisense RNA 1
SCARB1 scavenger receptor class B, member 1
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCGB1C1 secretoglobin, family 1C, member 1
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEPT12 septin 12
SERINC4 serine incorporator 4
SFRP2 secreted frizzled-related protein 2
SH2B2 SH2B adaptor protein 2
SH2D6 SH2 domain containing 6
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC39A11 solute carrier family 39, member 11
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLC6A18 solute carrier family 6 (neutral amino acid transporter), member 18
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNAR-B2 small ILF3/NF90-associated RNA B2
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA13 small nucleolar RNA, H/ACA box 13
SNORA15 small nucleolar RNA, H/ACA box 15
SNORA27 small nucleolar RNA, H/ACA box 27
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA71E small nucleolar RNA, H/ACA box 71E
SREBF1 sterol regulatory element binding transcription factor 1
SRPK3 SRSF protein kinase 3
STARD6 StAR-related lipid transfer (START) domain containing 6
STKLD1 serine/threonine kinase-like domain containing 1
SULF2 sulfatase 2
TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa
TAL2 T-cell acute lymphocytic leukemia 2
TAS2R46 taste receptor, type 2, member 46
TBATA thymus, brain and testes associated
TBC1D29 TBC1 domain family, member 29
TBX22 T-box 22
TDRP testis development related protein
TGM1 transglutaminase 1
TJAP1 tight junction associated protein 1 (peripheral)
TMCO6 transmembrane and coiled-coil domains 6
TMEM175 transmembrane protein 175
TMEM249 transmembrane protein 249
TMEM252 transmembrane protein 252
TMEM80 transmembrane protein 80
TMEM88B transmembrane protein 88B
TNK2 tyrosine kinase, non-receptor, 2
TOP3B topoisomerase (DNA) III beta
TPCN1 two pore segment channel 1
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
TRIM53AP tripartite motif containing 53A, pseudogene
TRIM64 tripartite motif containing 64
TSPO2 translocator protein 2
TSPY2 testis specific protein, Y-linked 2
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
TTYH2 tweety family member 2
TYMSOS TYMS opposite strand
UNKL unkempt family zinc finger-like
UPK3BL uroplakin 3B-like
USP50 ubiquitin specific peptidase 50
VCX2 variable charge, X-linked 2
VEPH1 ventricular zone expressed PH domain-containing 1
VN1R10P vomeronasal 1 receptor 10 pseudogene
WWP2 WW domain containing E3 ubiquitin protein ligase 2
ZBTB3 zinc finger and BTB domain containing 3
ZFP92 ZFP92 zinc finger protein
ZNF208 zinc finger protein 208
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF276 zinc finger protein 276
ZNF514 zinc finger protein 514
ZSCAN10 zinc finger and SCAN domain containing 10
ZSCAN2 zinc finger and SCAN domain containing 2