Brain Lower Grade Glioma_LGG_TCGA-DH-A66D-01A-11R-A31N-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

218 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DH-A66D-01A-11R-A31N-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ADGRB1 adhesion G protein-coupled receptor B1
ADGRF2 adhesion G protein-coupled receptor F2
ALDH1A2 aldehyde dehydrogenase 1 family, member A2
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
APOC4 apolipoprotein C-IV
ARHGAP36 Rho GTPase activating protein 36
ASB15 ankyrin repeat and SOCS box containing 15
ASCL4 achaete-scute family bHLH transcription factor 4
ATP5L2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit G2
ATXN7L2 ataxin 7-like 2
BCL9L B-cell CLL/lymphoma 9-like
BRD1 bromodomain containing 1
C17ORF47 chromosome 17 open reading frame 47
C3ORF22 chromosome 3 open reading frame 22
C3ORF30 chromosome 3 open reading frame 30
C6ORF58 chromosome 6 open reading frame 58
C7ORF13 chromosome 7 open reading frame 13
CARD18 caspase recruitment domain family, member 18
CCDC79 coiled-coil domain containing 79
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CDH26 cadherin 26
CDON cell adhesion associated, oncogene regulated
CDRT15 CMT1A duplicated region transcript 15
CELA1 chymotrypsin-like elastase family, member 1
CELA2B chymotrypsin-like elastase family, member 2B
CLDN17 claudin 17
CLEC17A C-type lectin domain family 17, member A
CLK2P1 CDC-like kinase 2, pseudogene 1
CNKSR3 CNKSR family member 3
COL4A6 collagen, type IV, alpha 6
CSMD2 CUB and Sushi multiple domains 2
CSNK1A1L casein kinase 1, alpha 1-like
CSTL1 cystatin-like 1
CTC1 CTS telomere maintenance complex component 1
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DEFB125 defensin, beta 125
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DLL1 delta-like 1 (Drosophila)
DOT1L DOT1-like histone H3K79 methyltransferase
EDARADD EDAR-associated death domain
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
EPGN epithelial mitogen
FAM66E family with sequence similarity 66, member E
FCMR Fc fragment of IgM receptor
FGF20 fibroblast growth factor 20
FLJ44635 TPT1-like protein
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GALNT1 polypeptide N-acetylgalactosaminyltransferase 1
GOLGA6L5P golgin A6 family-like 5, pseudogene
GOLGA8EP golgin A8 family, member E, pseudogene
GRHL3 grainyhead-like 3 (Drosophila)
GRIK3 glutamate receptor, ionotropic, kainate 3
GUCA2B guanylate cyclase activator 2B (uroguanylin)
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IFITM4P interferon induced transmembrane protein 4 pseudogene
IFNW1 interferon, omega 1
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL20 interleukin 20
INHBB inhibin, beta B
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit)
IVL involucrin
JRKL JRK-like
KCNK13 potassium channel, two pore domain subfamily K, member 13
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KIR3DL2 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 2
KLRC4 killer cell lectin-like receptor subfamily C, member 4
KRT76 keratin 76, type II
LCE1B late cornified envelope 1B
LCE1C late cornified envelope 1C
LCE1D late cornified envelope 1D
LCE6A late cornified envelope 6A
LECT2 leukocyte cell-derived chemotaxin 2
LINC00032 long intergenic non-protein coding RNA 32
LINC00244 long intergenic non-protein coding RNA 244
LINC00521 long intergenic non-protein coding RNA 521
LINC01553 long intergenic non-protein coding RNA 1553
LIPG lipase, endothelial
LOC100128164 four and a half LIM domains 1 pseudogene
LOC100130331 POTE ankyrin domain family, member F pseudogene
LOC100132831 A20-binding inhibitor of NF-kappaB activation 2 pseudogene
LOC100272216 uncharacterized LOC100272216
LOC401010 nucleolar complex associated 2 homolog (S. cerevisiae) pseudogene
LOC401127 WD repeat domain 5 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LOC649330
LOC650293 seven transmembrane helix receptor
LRIF1 ligand dependent nuclear receptor interacting factor 1
LRRC37A leucine rich repeat containing 37A
LRRC37A2 leucine rich repeat containing 37, member A2
LRRC52 leucine rich repeat containing 52
LYPLA2P1 lysophospholipase II pseudogene 1
MAGEA8 melanoma antigen family A8
MAP3K14 mitogen-activated protein kinase kinase kinase 14
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
METTL12 methyltransferase like 12
MEX3C mex-3 RNA binding family member C
MKL1 megakaryoblastic leukemia (translocation) 1
MKRN3 makorin ring finger protein 3
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MTHFR methylenetetrahydrofolate reductase (NAD(P)H)
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NKD1 naked cuticle homolog 1 (Drosophila)
NLRP4 NLR family, pyrin domain containing 4
NMB neuromedin B
NPPB natriuretic peptide B
NRTN neurturin
NXPH1 neurexophilin 1
NYNRIN NYN domain and retroviral integrase containing
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR4K2 olfactory receptor, family 4, subfamily K, member 2
OR4X2 olfactory receptor, family 4, subfamily X, member 2 (gene/pseudogene)
OR51B4 olfactory receptor, family 51, subfamily B, member 4
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR5AC2 olfactory receptor, family 5, subfamily AC, member 2
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OR5K2 olfactory receptor, family 5, subfamily K, member 2
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PABPC3 poly(A) binding protein, cytoplasmic 3
PCDHA7 protocadherin alpha 7
PDHA2 pyruvate dehydrogenase (lipoamide) alpha 2
PFKFB3 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3
PI4KAP1 phosphatidylinositol 4-kinase, catalytic, alpha pseudogene 1
PIGR polymeric immunoglobulin receptor
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PLA2G12B phospholipase A2, group XIIB
PNPLA1 patatin-like phospholipase domain containing 1
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PP2D1 protein phosphatase 2C-like domain containing 1
PPARD peroxisome proliferator-activated receptor delta
PPBPP2 pro-platelet basic protein pseudogene 2
PPEF2 protein phosphatase, EF-hand calcium binding domain 2
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PRR5L proline rich 5 like
PRSS37 protease, serine, 37
PTPRS protein tyrosine phosphatase, receptor type, S
RAI1 retinoic acid induced 1
RAPGEF1 Rap guanine nucleotide exchange factor (GEF) 1
RGPD1 RANBP2-like and GRIP domain containing 1
RGSL1 regulator of G-protein signaling like 1
RNASE8 ribonuclease, RNase A family, 8
RNF44 ring finger protein 44
RPL19P12 ribosomal protein L19 pseudogene 12
RPL31P11 ribosomal protein L31 pseudogene 11
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
RPS26P11 ribosomal protein S26 pseudogene 11
SBF1P1 SET binding factor 1 pseudogene 1
SCAND2P SCAN domain containing 2 pseudogene
SH2B2 SH2B adaptor protein 2
SH3BP2 SH3-domain binding protein 2
SH3RF1 SH3 domain containing ring finger 1
SIGLEC11 sialic acid binding Ig-like lectin 11
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SIGLECL1 SIGLEC family like 1
SLC22A20 solute carrier family 22, member 20
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A51 solute carrier family 25, member 51
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC35G5 solute carrier family 35, member G5
SMCP sperm mitochondria-associated cysteine-rich protein
SMG6 SMG6 nonsense mediated mRNA decay factor
SNX16 sorting nexin 16
SOCS6 suppressor of cytokine signaling 6
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SPRR4 small proline-rich protein 4
SUGT1P1 SUGT1 pseudogene 1
TAC4 tachykinin 4 (hemokinin)
TAGAP T-cell activation RhoGTPase activating protein
TAS2R1 taste receptor, type 2, member 1
TENM4 teneurin transmembrane protein 4
TMEM211 transmembrane protein 211
TSPAN10 tetraspanin 10
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UCP3 uncoupling protein 3 (mitochondrial, proton carrier)
URB1 URB1 ribosome biogenesis 1 homolog (S. cerevisiae)
UROC1 urocanate hydratase 1
VEPH1 ventricular zone expressed PH domain-containing 1
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
WBP11P1 WW domain binding protein 11 pseudogene 1
ZBED1 zinc finger, BED-type containing 1
ZBTB46 zinc finger and BTB domain containing 46
ZNF319 zinc finger protein 319
ZNF362 zinc finger protein 362
ZNF592 zinc finger protein 592
ZNF629 zinc finger protein 629
ZNF823 zinc finger protein 823
ZSCAN26 zinc finger and SCAN domain containing 26
ZSWIM1 zinc finger, SWIM-type containing 1

low expression

Symbol Name
AZI2 5-azacytidine induced 2
BCKDK branched chain ketoacid dehydrogenase kinase
CCDC51 coiled-coil domain containing 51
CHMP2B charged multivesicular body protein 2B
DYNC1LI1 dynein, cytoplasmic 1, light intermediate chain 1
GLT8D1 glycosyltransferase 8 domain containing 1
KIAA1143 KIAA1143
MLH1 mutL homolog 1
PDHB pyruvate dehydrogenase (lipoamide) beta
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PSMD6 proteasome (prosome, macropain) 26S subunit, non-ATPase, 6
RPP14 ribonuclease P/MRP 14kDa subunit
SLC25A38 solute carrier family 25, member 38
SPCS1 signal peptidase complex subunit 1 homolog (S. cerevisiae)
THOC7 THO complex 7
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
UBA3 ubiquitin-like modifier activating enzyme 3
UBP1 upstream binding protein 1 (LBP-1a)
USP4 ubiquitin specific peptidase 4 (proto-oncogene)