Brain Lower Grade Glioma_LGG_TCGA-DB-A75L-01A-11R-A32Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

247 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A75L-01A-11R-A32Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD11 acyl-CoA dehydrogenase family, member 11
ACAD8 acyl-CoA dehydrogenase family, member 8
ACER1 alkaline ceramidase 1
ADGRB1 adhesion G protein-coupled receptor B1
AHCTF1 AT hook containing transcription factor 1
AMY1A amylase, alpha 1A (salivary)
ANKDD1A ankyrin repeat and death domain containing 1A
ANKRD49 ankyrin repeat domain 49
AQP11 aquaporin 11
ARHGEF17 Rho guanine nucleotide exchange factor (GEF) 17
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ASAP1-IT1 ASAP1 intronic transcript 1
ASB15 ankyrin repeat and SOCS box containing 15
ASIC5 acid sensing (proton gated) ion channel family member 5
ATG14 autophagy related 14
BCYRN1 brain cytoplasmic RNA 1
BUD13 BUD13 homolog (S. cerevisiae)
C10ORF99 chromosome 10 open reading frame 99
C11ORF54 chromosome 11 open reading frame 54
C11ORF57 chromosome 11 open reading frame 57
C16ORF45 chromosome 16 open reading frame 45
C20ORF203 chromosome 20 open reading frame 203
C7ORF71 chromosome 7 open reading frame 71
CCDC116 coiled-coil domain containing 116
CCDC172 coiled-coil domain containing 172
CCDC7 coiled-coil domain containing 7
CCDC82 coiled-coil domain containing 82
CCT8L2 chaperonin containing TCP1, subunit 8 (theta)-like 2
CDK8 cyclin-dependent kinase 8
CEP164 centrosomal protein 164kDa
CERS3 ceramide synthase 3
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CRCT1 cysteine-rich C-terminal 1
CREBZF CREB/ATF bZIP transcription factor
CROCCP2 ciliary rootlet coiled-coil, rootletin pseudogene 2
CRYGC crystallin, gamma C
CSRP2 cysteine and glycine-rich protein 2
CT45A5 cancer/testis antigen family 45, member A5
CT55 cancer/testis antigen 55
CUL5 cullin 5
DDB1 damage-specific DNA binding protein 1, 127kDa
DEFB103B defensin, beta 103B
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6
DGKA diacylglycerol kinase, alpha 80kDa
DLX4 distal-less homeobox 4
DNTT DNA nucleotidylexotransferase
DSG1 desmoglein 1
DSG3 desmoglein 3
EED embryonic ectoderm development
EIF1AD eukaryotic translation initiation factor 1A domain containing
ENPP3 ectonucleotide pyrophosphatase/phosphodiesterase 3
EPGN epithelial mitogen
FAM182A family with sequence similarity 182, member A
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM25A family with sequence similarity 25, member A
FAM53C family with sequence similarity 53, member C
FAM69A family with sequence similarity 69, member A
FAM76B family with sequence similarity 76, member B
FBXL12 F-box and leucine-rich repeat protein 12
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FOPNL FGFR1OP N-terminal like
FRG2 FSHD region gene 2
GABRR3 gamma-aminobutyric acid (GABA) A receptor, rho 3 (gene/pseudogene)
GJB7 gap junction protein, beta 7, 25kDa
GLYATL2 glycine-N-acyltransferase-like 2
GNRH2 gonadotropin-releasing hormone 2
GOLGA6A golgin A6 family, member A
GOLGA6B golgin A6 family, member B
GP6 glycoprotein VI (platelet)
GPR32 G protein-coupled receptor 32
GSTTP2 glutathione S-transferase theta pseudogene 2
GTSF1L gametocyte specific factor 1-like
HEMGN hemogen
HEPHL1 hephaestin-like 1
HERC2P4 hect domain and RLD 2 pseudogene 4
HINFP histone H4 transcription factor
HNRNPA0 heterogeneous nuclear ribonucleoprotein A0
HNRNPUL2 heterogeneous nuclear ribonucleoprotein U-like 2
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSFY1P1 heat shock transcription factor, Y-linked 1 pseudogene 1
IFNA21 interferon, alpha 21
IL31 interleukin 31
IL36G interleukin 36, gamma
IL36RN interleukin 36 receptor antagonist
INTS5 integrator complex subunit 5
IQCB1 IQ motif containing B1
IVL involucrin
KAT5 K(lysine) acetyltransferase 5
KHDRBS2 KH domain containing, RNA binding, signal transduction associated 2
KLK9 kallikrein-related peptidase 9
KRT14 keratin 14, type I
KRT16 keratin 16, type I
KRT5 keratin 5, type II
KRT6A keratin 6A, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
KRTAP4-4 keratin associated protein 4-4
KRTAP4-8 keratin associated protein 4-8
KRTDAP keratinocyte differentiation-associated protein
LAMC2 laminin, gamma 2
LCE1F late cornified envelope 1F
LCE2B late cornified envelope 2B
LCE2D late cornified envelope 2D
LCE3D late cornified envelope 3D
LCE3E late cornified envelope 3E
LINC00052 long intergenic non-protein coding RNA 52
LINC00158 long intergenic non-protein coding RNA 158
LIPI lipase, member I
LOC100128076 protein tyrosine phosphatase pseudogene
LOC100130987 uncharacterized LOC100130987
LOC100133050 glucuronidase, beta pseudogene
LOC154449 uncharacterized LOC154449
LOC284632 uncharacterized LOC284632
LOC286094
LOC440040 glutamate receptor, metabotropic 5 pseudogene
LOC646471 uncharacterized LOC646471
LRCH2 leucine-rich repeats and calponin homology (CH) domain containing 2
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
MAGEA8 melanoma antigen family A8
MAGEA9B melanoma antigen family A9B
MED17 mediator complex subunit 17
MEF2BNB-MEF2B MEF2BNB-MEF2B readthrough
MS4A12 membrane-spanning 4-domains, subfamily A, member 12
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MUS81 MUS81 structure-specific endonuclease subunit
MYOZ2 myozenin 2
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit
NAA40 N(alpha)-acetyltransferase 40, NatD catalytic subunit
NAGS N-acetylglutamate synthase
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NFRKB nuclear factor related to kappaB binding protein
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
NUTM2F NUT family member 2F
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR1L4 olfactory receptor, family 1, subfamily L, member 4
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR5K1 olfactory receptor, family 5, subfamily K, member 1
OSBPL11 oxysterol binding protein-like 11
OVGP1 oviductal glycoprotein 1, 120kDa
PAAF1 proteasomal ATPase-associated factor 1
PADI3 peptidyl arginine deiminase, type III
PCDHA8 protocadherin alpha 8
PCDHGA6 protocadherin gamma subfamily A, 6
PCF11 PCF11 cleavage and polyadenylation factor subunit
PCSK7 proprotein convertase subtilisin/kexin type 7
PCTP phosphatidylcholine transfer protein
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PDZD3 PDZ domain containing 3
PDZK1P1 PDZ domain containing 1 pseudogene 1
PI3 peptidase inhibitor 3, skin-derived
PLAC8L1 PLAC8-like 1
PLCD4 phospholipase C, delta 4
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPIEL peptidylprolyl isomerase E-like pseudogene
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2
PPP6R3 protein phosphatase 6, regulatory subunit 3
PRKRIR protein-kinase, interferon-inducible double stranded RNA dependent inhibitor, repressor of (P58 repressor)
PRPF38B pre-mRNA processing factor 38B
PRSS38 protease, serine, 38
PRSS41 protease, serine, 41
PSG6 pregnancy specific beta-1-glycoprotein 6
RBM33 RNA binding motif protein 33
RBM44 RNA binding motif protein 44
RBM5 RNA binding motif protein 5
REPS1 RALBP1 associated Eps domain containing 1
RIOK2 RIO kinase 2
RNASE8 ribonuclease, RNase A family, 8
RNF207 ring finger protein 207
RNF214 ring finger protein 214
RNF222 ring finger protein 222
RNU6ATAC RNA, U6atac small nuclear (U12-dependent splicing)
RPA4 replication protein A4, 30kDa
RPTN repetin
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RSPO4 R-spondin 4
SAGE1 sarcoma antigen 1
SAMD13 sterile alpha motif domain containing 13
SCGB1C1 secretoglobin, family 1C, member 1
SEMA6A sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6A
SERPINB11 serpin peptidase inhibitor, clade B (ovalbumin), member 11 (gene/pseudogene)
SERPINB5 serpin peptidase inhibitor, clade B (ovalbumin), member 5
SIGLECL1 SIGLEC family like 1
SLC10A2 solute carrier family 10 (sodium/bile acid cotransporter), member 2
SLC25A47 solute carrier family 25, member 47
SLC35G5 solute carrier family 35, member G5
SLC6A14 solute carrier family 6 (amino acid transporter), member 14
SNCG synuclein, gamma (breast cancer-specific protein 1)
SNHG1 small nucleolar RNA host gene 1
SNORA71E small nucleolar RNA, H/ACA box 71E
SNORA8 small nucleolar RNA, H/ACA box 8
SPANXC SPANX family, member C
SPINK9 serine peptidase inhibitor, Kazal type 9
SPRR1A small proline-rich protein 1A
SPRR1B small proline-rich protein 1B
SPRR2A small proline-rich protein 2A
SPRR2B small proline-rich protein 2B
SPRR2D small proline-rich protein 2D
SPRR2E small proline-rich protein 2E
SPRR2G small proline-rich protein 2G
SRP19 signal recognition particle 19kDa
SRRM1 serine/arginine repetitive matrix 1
SRSF11 serine/arginine-rich splicing factor 11
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila)
SYCP2L synaptonemal complex protein 2-like
TAS2R42 taste receptor, type 2, member 42
TBC1D32 TBC1 domain family, member 32
TBPL1 TBP-like 1
TBX10 T-box 10
TCP10L2 t-complex 10-like 2
TMEM126B transmembrane protein 126B
TMEM136 transmembrane protein 136
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough
TMEM216 transmembrane protein 216
TMEM31 transmembrane protein 31
TPSD1 tryptase delta 1
TRIML2 tripartite motif family-like 2
TRIT1 tRNA isopentenyltransferase 1
TSPAN14 tetraspanin 14
TTC9C tetratricopeptide repeat domain 9C
UBE2D2 ubiquitin-conjugating enzyme E2D 2
UGT2B10 UDP glucuronosyltransferase 2 family, polypeptide B10
UNC5CL unc-5 homolog C (C. elegans)-like
UPP2 uridine phosphorylase 2
USP28 ubiquitin specific peptidase 28
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
VRTN vertebrae development associated
WDR36 WD repeat domain 36
WFDC12 WAP four-disulfide core domain 12
WFDC5 WAP four-disulfide core domain 5
WNT8A wingless-type MMTV integration site family, member 8A
YTHDC2 YTH domain containing 2
ZBTB16 zinc finger and BTB domain containing 16
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF441 zinc finger protein 441
ZNF708 zinc finger protein 708
ZNF709 zinc finger protein 709
ZNF826P zinc finger protein 826, pseudogene

low expression

Symbol Name
FAF2 Fas associated factor family member 2
GEMIN5 gem (nuclear organelle) associated protein 5
KIAA1191 KIAA1191
MAGT1 magnesium transporter 1
MSH3 mutS homolog 3
RRAGA Ras-related GTP binding A
TMCO6 transmembrane and coiled-coil domains 6