Brain Lower Grade Glioma_LGG_TCGA-DB-A64V-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

374 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64V-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABCA2 ATP-binding cassette, sub-family A (ABC1), member 2
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABHD12 abhydrolase domain containing 12
ABHD17A abhydrolase domain containing 17A
ABHD17B abhydrolase domain containing 17B
ACTL10 actin-like 10
ADAM15 ADAM metallopeptidase domain 15
ADAP1 ArfGAP with dual PH domains 1
AFMID arylformamidase
ALDOB aldolase B, fructose-bisphosphate
ALOX15B arachidonate 15-lipoxygenase, type B
APIP APAF1 interacting protein
APLP1 amyloid beta (A4) precursor-like protein 1
APOBR apolipoprotein B receptor
APOC1 apolipoprotein C-I
APOC4 apolipoprotein C-IV
ARHGAP8 Rho GTPase activating protein 8
ARRDC2 arrestin domain containing 2
ASIP agouti signaling protein
ASPA aspartoacylase
ATG3 autophagy related 3
B3GALT4 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 4
B3GAT1 beta-1,3-glucuronyltransferase 1
BIN1 bridging integrator 1
BIRC7 baculoviral IAP repeat containing 7
BLOC1S1 biogenesis of lysosomal organelles complex-1, subunit 1
BOK BCL2-related ovarian killer
BTF3P11 basic transcription factor 3 pseudogene 11
C10ORF113 chromosome 10 open reading frame 113
C10ORF32 chromosome 10 open reading frame 32
C10ORF62 chromosome 10 open reading frame 62
C10ORF90 chromosome 10 open reading frame 90
C11ORF16 chromosome 11 open reading frame 16
C14ORF28 chromosome 14 open reading frame 28
C16ORF90 chromosome 16 open reading frame 90
C18ORF32 chromosome 18 open reading frame 32
C19ORF35 chromosome 19 open reading frame 35
C1QTNF9 C1q and tumor necrosis factor related protein 9
C22ORF31 chromosome 22 open reading frame 31
C8G complement component 8, gamma polypeptide
C9 complement component 9
C9ORF153 chromosome 9 open reading frame 153
C9ORF156 chromosome 9 open reading frame 156
CAPG capping protein (actin filament), gelsolin-like
CAPN3 calpain 3, (p94)
CC2D1B coiled-coil and C2 domain containing 1B
CCDC53 coiled-coil domain containing 53
CCDC54 coiled-coil domain containing 54
CCR10 chemokine (C-C motif) receptor 10
CD22 CD22 molecule
CD300LF CD300 molecule-like family member f
CD37 CD37 molecule
CD48 CD48 molecule
CD99 CD99 molecule
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1
CDC42EP2 CDC42 effector protein (Rho GTPase binding) 2
CDK18 cyclin-dependent kinase 18
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDR2L cerebellar degeneration-related protein 2-like
CEBPD CCAAT/enhancer binding protein (C/EBP), delta
CERCAM cerebral endothelial cell adhesion molecule
CFL2 cofilin 2 (muscle)
CHADL chondroadherin-like
CHIT1 chitinase 1 (chitotriosidase)
CHN2 chimerin 2
CLCA2 chloride channel accessory 2
CLCA4 chloride channel accessory 4
CLCN7 chloride channel, voltage-sensitive 7
CLDN11 claudin 11
CLDN17 claudin 17
CLDND1 claudin domain containing 1
CLEC4A C-type lectin domain family 4, member A
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNGA1 cyclic nucleotide gated channel alpha 1
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COMT catechol-O-methyltransferase
CPOX coproporphyrinogen oxidase
CPPED1 calcineurin-like phosphoesterase domain containing 1
CTRB2 chymotrypsinogen B2
CTSD cathepsin D
CYB561D2 cytochrome b561 family, member D2
CYB5R2 cytochrome b5 reductase 2
CYP27A1 cytochrome P450, family 27, subfamily A, polypeptide 1
CYTIP cytohesin 1 interacting protein
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DENND2D DENN/MADD domain containing 2D
DNAH17 dynein, axonemal, heavy chain 17
DNAJC5B DnaJ (Hsp40) homolog, subfamily C, member 5 beta
DNASE2B deoxyribonuclease II beta
DOHH deoxyhypusine hydroxylase/monooxygenase
DPEP2 dipeptidase 2
DYNLL1 dynein, light chain, LC8-type 1
ELOVL1 ELOVL fatty acid elongase 1
ENOSF1 enolase superfamily member 1
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
EVI2A ecotropic viral integration site 2A
FA2H fatty acid 2-hydroxylase
FAAH fatty acid amide hydrolase
FAM102A family with sequence similarity 102, member A
FAM107B family with sequence similarity 107, member B
FAM131C family with sequence similarity 131, member C
FAM134B family with sequence similarity 134, member B
FAM183B acyloxyacyl hydrolase (neutrophil)
FAM187B family with sequence similarity 187, member B
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4
FAM201A family with sequence similarity 201, member A
FAM225A family with sequence similarity 225, member A (non-protein coding)
FAM53B family with sequence similarity 53, member B
FAM58A family with sequence similarity 58, member A
FAM9C family with sequence similarity 9, member C
FCHO1 FCH domain only 1
FEZ1 fasciculation and elongation protein zeta 1 (zygin I)
FGR FGR proto-oncogene, Src family tyrosine kinase
FN3KRP fructosamine 3 kinase related protein
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FOXB2 forkhead box B2
FXYD4 FXYD domain containing ion transport regulator 4
FXYD5 FXYD domain containing ion transport regulator 5
GAL3ST1 galactose-3-O-sulfotransferase 1
GALNT6 polypeptide N-acetylgalactosaminyltransferase 6
GAST gastrin
GCSAM germinal center-associated, signaling and motility
GDF1 growth differentiation factor 1
GJB1 gap junction protein, beta 1, 32kDa
GJC2 gap junction protein, gamma 2, 47kDa
GLTP glycolipid transfer protein
GNPTG N-acetylglucosamine-1-phosphate transferase, gamma subunit
GOLGA7 golgin A7
GOLGA8EP golgin A8 family, member E, pseudogene
GPIHBP1 glycosylphosphatidylinositol anchored high density lipoprotein binding protein 1
GPNMB glycoprotein (transmembrane) nmb
GPR62 G protein-coupled receptor 62
GRAPL GRB2-related adaptor protein-like
GREM1 gremlin 1, DAN family BMP antagonist
GSN gelsolin
GSTO1 glutathione S-transferase omega 1
GSTZ1 glutathione S-transferase zeta 1
GZMH granzyme H (cathepsin G-like 2, protein h-CCPX)
HDAC11 histone deacetylase 11
HERPUD1 homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1
HHATL hedgehog acyltransferase-like
HHIP hedgehog interacting protein
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HOXD1 homeobox D1
HSD17B3 hydroxysteroid (17-beta) dehydrogenase 3
HSPA2 heat shock 70kDa protein 2
HTRA4 HtrA serine peptidase 4
IDI2-AS1 IDI2 antisense RNA 1
IFNL3 interferon, lambda 3
IGFL3 IGF-like family member 3
IGSF6 immunoglobulin superfamily, member 6
IGSF8 immunoglobulin superfamily, member 8
IKBKG inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase gamma
IL32 interleukin 32
INF2 inverted formin, FH2 and WH2 domain containing
INPP1 inositol polyphosphate-1-phosphatase
IP6K3 inositol hexakisphosphate kinase 3
IQCK IQ motif containing K
ITGAX integrin, alpha X (complement component 3 receptor 4 subunit)
ITM2B integral membrane protein 2B
JAM3 junctional adhesion molecule 3
JOSD2 Josephin domain containing 2
KCNK12 potassium channel, two pore domain subfamily K, member 12
KCNK17 potassium channel, two pore domain subfamily K, member 17
KCNK18 potassium channel, two pore domain subfamily K, member 18
KCNMB4 potassium channel subfamily M regulatory beta subunit 4
KDSR 3-ketodihydrosphingosine reductase
KIAA0930 KIAA0930
KIF19 kinesin family member 19
KLHL6 kelch-like family member 6
KLK6 kallikrein-related peptidase 6
KRT36 keratin 36, type I
KRT40 keratin 40, type I
KRTAP5-3 keratin associated protein 5-3
KRTAP5-7 keratin associated protein 5-7
KRTAP5-9 keratin associated protein 5-9
LARP6 La ribonucleoprotein domain family, member 6
LCAT lecithin-cholesterol acyltransferase
LCE1D late cornified envelope 1D
LGALS3 lectin, galactoside-binding, soluble, 3
LGALS9C lectin, galactoside-binding, soluble, 9C
LGI3 leucine-rich repeat LGI family, member 3
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LILRA2 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 2
LILRA4 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
LILRA6 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
LILRB3 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 3
LINC00320 long intergenic non-protein coding RNA 320
LIPA lipase A, lysosomal acid, cholesterol esterase
LIPE lipase, hormone-sensitive
LOC100271832 uncharacterized LOC100271832
LOC389033 placenta-specific 9 pseudogene
LOC644145 exocyst complex component 1 pseudogene
LOC644172 mitogen-activated protein kinase 8 interacting protein 1 pseudogene
LOC653786 otoancorin pseudogene
LOC729609 uncharacterized LOC729609
LRRC25 leucine rich repeat containing 25
LURAP1L leucine rich adaptor protein 1-like
LZTS2 leucine zipper, putative tumor suppressor 2
MAG myelin associated glycoprotein
MAL mal, T-cell differentiation protein
MAP3K11 mitogen-activated protein kinase kinase kinase 11
MAP6D1 MAP6 domain containing 1
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MCOLN1 mucolipin 1
MIA2 melanoma inhibitory activity 2
MID1IP1 MID1 interacting protein 1
MLPH melanophilin
MOCS1 molybdenum cofactor synthesis 1
MOG myelin oligodendrocyte glycoprotein
MPC1 mitochondrial pyruvate carrier 1
MRGPRX1 MAS-related GPR, member X1
MROH2B maestro heat-like repeat family member 2B
MRPL34 mitochondrial ribosomal protein L34
MRPL48 mitochondrial ribosomal protein L48
MRPS18C mitochondrial ribosomal protein S18C
MTIF3 mitochondrial translational initiation factor 3
MYO1A myosin IA
MYO1D myosin ID
MYRF myelin regulatory factor
NAGK N-acetylglucosamine kinase
NCF2 neutrophil cytosolic factor 2
NDUFAF3 NADH dehydrogenase (ubiquinone) complex I, assembly factor 3
NDUFS7 NADH dehydrogenase (ubiquinone) Fe-S protein 7, 20kDa (NADH-coenzyme Q reductase)
NINJ2 ninjurin 2
NIPAL4 NIPA-like domain containing 4
NKAIN2 Na+/K+ transporting ATPase interacting 2
NKX2-3 NK2 homeobox 3
NKX6-2 NK6 homeobox 2
NMRK2 nicotinamide riboside kinase 2
NPC2 Niemann-Pick disease, type C2
NUDCD2 NudC domain containing 2
NUDT18 nudix (nucleoside diphosphate linked moiety X)-type motif 18
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6
NUPR1 nuclear protein, transcriptional regulator, 1
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OPN5 opsin 5
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR7E91P olfactory receptor, family 7, subfamily E, member 91 pseudogene
OSTF1 osteoclast stimulating factor 1
OTOA otoancorin
PACS2 phosphofurin acidic cluster sorting protein 2
PAGE5 P antigen family, member 5 (prostate associated)
PAOX polyamine oxidase (exo-N4-amino)
PAQR4 progestin and adipoQ receptor family member IV
PDE6G phosphodiesterase 6G, cGMP-specific, rod, gamma
PDIA2 protein disulfide isomerase family A, member 2
PGF placental growth factor
PHLDA3 pleckstrin homology-like domain, family A, member 3
PIGH phosphatidylinositol glycan anchor biosynthesis, class H
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha
PKD2L1 polycystic kidney disease 2-like 1
PLA2G16 phospholipase A2, group XVI
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PLLP plasmolipin
PMP22 peripheral myelin protein 22
POC1B POC1 centriolar protein B
POU1F1 POU class 1 homeobox 1
POU5F1 POU class 5 homeobox 1
PPAP2C phosphatidic acid phosphatase type 2C
PPARG peroxisome proliferator-activated receptor gamma
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PRR18 proline rich 18
PRSS30P protease, serine, 30, pseudogene
PSEN1 presenilin 1
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
PSTK phosphoseryl-tRNA kinase
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTPRH protein tyrosine phosphatase, receptor type, H
PTTG2 pituitary tumor-transforming 2
QDPR quinoid dihydropteridine reductase
RAB40B RAB40B, member RAS oncogene family
RAB4B RAB4B, member RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RBMXL2 RNA binding motif protein, X-linked-like 2
RBP7 retinol binding protein 7, cellular
RDH14 retinol dehydrogenase 14 (all-trans/9-cis/11-cis)
RENBP renin binding protein
RERGL RERG/RAS-like
RHOG ras homolog family member G
RILPL1 Rab interacting lysosomal protein-like 1
RNASE1 ribonuclease, RNase A family, 1 (pancreatic)
RNF126 ring finger protein 126
RNF13 ring finger protein 13
RNF130 ring finger protein 130
RNH1 ribonuclease/angiogenin inhibitor 1
ROGDI rogdi homolog (Drosophila)
RTFDC1 replication termination factor 2 domain containing 1
S1PR5 sphingosine-1-phosphate receptor 5
SCGB1D4 secretoglobin, family 1D, member 4
SCN10A sodium channel, voltage gated, type X alpha subunit
SEMA3B sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3B
SEPT4 septin 4
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12
SFT2D1 SFT2 domain containing 1
SHROOM1 shroom family member 1
SIGLEC15 sialic acid binding Ig-like lectin 15
SIGLEC7 sialic acid binding Ig-like lectin 7
SLAIN1 SLAIN motif family, member 1
SLAMF7 SLAM family member 7
SLAMF8 SLAM family member 8
SLC15A3 solute carrier family 15 (oligopeptide transporter), member 3
SLC17A9 solute carrier family 17 (vesicular nucleotide transporter), member 9
SLC31A2 solute carrier family 31 (copper transporter), member 2
SLC45A3 solute carrier family 45, member 3
SLC48A1 solute carrier family 48 (heme transporter), member 1
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLED1 proteoglycan 3 pseudogene
SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
STX19 syntaxin 19
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2
SUMO1P1 SUMO1 pseudogene 1
SVIP small VCP/p97-interacting protein
SYNGR2 synaptogyrin 2
TALDO1 transaldolase 1
TBC1D10B TBC1 domain family, member 10B
TBC1D2 TBC1 domain family, member 2
TBCC tubulin folding cofactor C
TECR trans-2,3-enoyl-CoA reductase
TFEB transcription factor EB
TGM6 transglutaminase 6
TIAF1 TGFB1-induced anti-apoptotic factor 1
TMC6 transmembrane channel-like 6
TMC7 transmembrane channel-like 7
TMEM125 transmembrane protein 125
TMEM126B transmembrane protein 126B
TMEM128 transmembrane protein 128
TMEM144 transmembrane protein 144
TMEM151A transmembrane protein 151A
TMEM165 transmembrane protein 165
TMEM178A transmembrane protein 178A
TMEM189 transmembrane protein 189
TMEM88B transmembrane protein 88B
TMEM95 transmembrane protein 95
TNFRSF14 tumor necrosis factor receptor superfamily, member 14
TP53TG5 TP53 target 5
TPRN taperin
TRIP4 thyroid hormone receptor interactor 4
TRPC2 transient receptor potential cation channel, subfamily C, member 2, pseudogene
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSPAN15 tetraspanin 15
TSPY1 testis specific protein, Y-linked 1
TTYH2 tweety family member 2
TYMSOS TYMS opposite strand
UAP1L1 UDP-N-acetylglucosamine pyrophosphorylase 1 like 1
UGT2B28 UDP glucuronosyltransferase 2 family, polypeptide B28
VNN1 vanin 1
VSX2 visual system homeobox 2
VWA1 von Willebrand factor A domain containing 1
XCL2 chemokine (C motif) ligand 2
ZMYND15 zinc finger, MYND-type containing 15
ZNF385A zinc finger protein 385A
ZNF839 zinc finger protein 839

low expression

Symbol Name
CELF1 CUGBP, Elav-like family member 1
CXORF56 chromosome X open reading frame 56
GON4L gon-4-like (C. elegans)
RAD50 RAD50 homolog (S. cerevisiae)
RBM8A RNA binding motif protein 8A
RPL7L1 ribosomal protein L7-like 1
TSR1 TSR1, 20S rRNA accumulation, homolog (S. cerevisiae)