Brain Lower Grade Glioma_LGG_TCGA-DB-A64U-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

180 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64U-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABHD17B abhydrolase domain containing 17B
AFMID arylformamidase
AKAP7 A kinase (PRKA) anchor protein 7
ANGEL1 angel homolog 1 (Drosophila)
ARL4A ADP-ribosylation factor-like 4A
ASPA aspartoacylase
BMP2 bone morphogenetic protein 2
C14ORF28 chromosome 14 open reading frame 28
C15ORF53 chromosome 15 open reading frame 53
C1ORF68 chromosome 1 open reading frame 68
C21ORF91 chromosome 21 open reading frame 91
C4ORF32 chromosome 4 open reading frame 32
CARNS1 carnosine synthase 1
CBS cystathionine-beta-synthase
CCDC172 coiled-coil domain containing 172
CCDC54 coiled-coil domain containing 54
CCDC7 coiled-coil domain containing 7
CD1D CD1d molecule
CDC42EP1 CDC42 effector protein (Rho GTPase binding) 1
CEP44 centrosomal protein 44kDa
CFL2 cofilin 2 (muscle)
CLCA2 chloride channel accessory 2
CLCA4 chloride channel accessory 4
CLDND1 claudin domain containing 1
CLEC4F C-type lectin domain family 4, member F
CLK1 CDC-like kinase 1
CLK4 CDC-like kinase 4
COL4A5 collagen, type IV, alpha 5
CPB2 carboxypeptidase B2 (plasma)
CXORF58 chromosome X open reading frame 58
DAND5 DAN domain family member 5, BMP antagonist
DEPDC7 DEP domain containing 7
DNAH17 dynein, axonemal, heavy chain 17
ENPP2 ectonucleotide pyrophosphatase/phosphodiesterase 2
ERMN ermin, ERM-like protein
ERMP1 endoplasmic reticulum metallopeptidase 1
EYA1 EYA transcriptional coactivator and phosphatase 1
FA2H fatty acid 2-hydroxylase
FABP2 fatty acid binding protein 2, intestinal
FAM178A family with sequence similarity 178, member A
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4
FAM218A family with sequence similarity 218, member A
FAM226B family with sequence similarity 226, member B (non-protein coding)
FAR1 fatty acyl CoA reductase 1
FHDC1 FH2 domain containing 1
FOLH1 folate hydrolase (prostate-specific membrane antigen) 1
FXYD4 FXYD domain containing ion transport regulator 4
GDF9 growth differentiation factor 9
GIN1 gypsy retrotransposon integrase 1
GJB1 gap junction protein, beta 1, 32kDa
GLDN gliomedin
GLT6D1 glycosyltransferase 6 domain containing 1
GNAI1 guanine nucleotide binding protein (G protein), alpha inhibiting activity polypeptide 1
GOLGA7 golgin A7
GOLGA8EP golgin A8 family, member E, pseudogene
GPR85 G protein-coupled receptor 85
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
HBS1L HBS1-like translational GTPase
HERC2P2 hect domain and RLD 2 pseudogene 2
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HNF1A-AS1 HNF1A antisense RNA 1
HOXD1 homeobox D1
HSF2BP heat shock transcription factor 2 binding protein
HULC hepatocellular carcinoma up-regulated long non-coding RNA
IFNA2 interferon, alpha 2
INPP1 inositol polyphosphate-1-phosphatase
JAKMIP3 Janus kinase and microtubule interacting protein 3
KCNH8 potassium channel, voltage gated eag related subfamily H, member 8
KIAA1598
KLF1 Kruppel-like factor 1 (erythroid)
LACC1 laccase (multicopper oxidoreductase) domain containing 1
LAYN layilin
LDB3 LIM domain binding 3
LGR5 leucine-rich repeat containing G protein-coupled receptor 5
LHX3 LIM homeobox 3
LIAS lipoic acid synthetase
LINC00176 long intergenic non-protein coding RNA 176
LINC00320 long intergenic non-protein coding RNA 320
LINS lines homolog (Drosophila)
LYZL2 lysozyme-like 2
MAG myelin associated glycoprotein
MAP6D1 MAP6 domain containing 1
MBL1P mannose-binding lectin (protein A) 1, pseudogene
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MOBP myelin-associated oligodendrocyte basic protein
MOG myelin oligodendrocyte glycoprotein
MOSPD2 motile sperm domain containing 2
MST1L macrophage stimulating 1-like
MYRF myelin regulatory factor
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NAALAD2 N-acetylated alpha-linked acidic dipeptidase 2
NANOG Nanog homeobox
NAP1L6 nucleosome assembly protein 1-like 6
NEK3 NIMA-related kinase 3
NEUROD1 neuronal differentiation 1
NFYB nuclear transcription factor Y, beta
NIPA1 non imprinted in Prader-Willi/Angelman syndrome 1
NIPAL4 NIPA-like domain containing 4
NKAIN2 Na+/K+ transporting ATPase interacting 2
NKAP NFKB activating protein
NOTUM notum pectinacetylesterase homolog (Drosophila)
NPC1 Niemann-Pick disease, type C1
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NRARP NOTCH-regulated ankyrin repeat protein
NUTM2F NUT family member 2F
NXF4 nuclear RNA export factor 4 pseudogene
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR2A4 olfactory receptor, family 2, subfamily A, member 4
PAPL iron/zinc purple acid phosphatase-like protein
PCDHA3 protocadherin alpha 3
PCDHA9 protocadherin alpha 9
PCDHB6 protocadherin beta 6
PLCL1 phospholipase C-like 1
PLEKHG3 pleckstrin homology domain containing, family G (with RhoGef domain) member 3
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLP1 proteolipid protein 1
PRAMEF2 PRAME family member 2
PRAMEF8 PRAME family member 8
PRRG1 proline rich Gla (G-carboxyglutamic acid) 1
PSEN1 presenilin 1
PTCHD3 patched domain containing 3
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPRH protein tyrosine phosphatase, receptor type, H
PWWP2A PWWP domain containing 2A
RAB6C RAB6C, member RAS oncogene family
RASGRP3 RAS guanyl releasing protein 3 (calcium and DAG-regulated)
RBMXL2 RNA binding motif protein, X-linked-like 2
REC114 REC114 meiotic recombination protein
RHBDL2 rhomboid, veinlet-like 2 (Drosophila)
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RUFY2 RUN and FYVE domain containing 2
RUSC1-AS1 RUSC1 antisense RNA 1
S1PR5 sphingosine-1-phosphate receptor 5
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SCML2 sex comb on midleg-like 2 (Drosophila)
SEC14L5 SEC14-like 5 (S. cerevisiae)
SECISBP2L SECIS binding protein 2-like
SENP7 SUMO1/sentrin specific peptidase 7
SFR1 SWI5-dependent recombination repair 1
SGK2 serum/glucocorticoid regulated kinase 2
SLC12A2 solute carrier family 12 (sodium/potassium/chloride transporter), member 2
SLC19A3 solute carrier family 19 (thiamine transporter), member 3
SLC5A10 solute carrier family 5 (sodium/sugar cotransporter), member 10
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11
SLC7A13 solute carrier family 7 (anionic amino acid transporter), member 13
SLCO1A2 solute carrier organic anion transporter family, member 1A2
SLITRK6 SLIT and NTRK-like family, member 6
SNORA71E small nucleolar RNA, H/ACA box 71E
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SNX6 sorting nexin 6
SPINK7 serine peptidase inhibitor, Kazal type 7 (putative)
SPOCK3 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 3
SPOPL speckle-type POZ protein-like
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TARSL2 threonyl-tRNA synthetase-like 2
TBC1D12 TBC1 domain family, member 12
TEDDM1 transmembrane epididymal protein 1
TJAP1 tight junction associated protein 1 (peripheral)
TMC7 transmembrane channel-like 7
TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1
TMEM144 transmembrane protein 144
TMEM206 transmembrane protein 206
TMEM257 transmembrane protein 257
TRAM1L1 translocation associated membrane protein 1-like 1
TRIM59 tripartite motif containing 59
TRIM64 tripartite motif containing 64
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSIX TSIX transcript, XIST antisense RNA
TTC14 tetratricopeptide repeat domain 14
TYMSOS TYMS opposite strand
UGT8 UDP glycosyltransferase 8
ZFP57 ZFP57 zinc finger protein
ZFYVE16 zinc finger, FYVE domain containing 16
ZIM3 zinc finger, imprinted 3
ZNF451 zinc finger protein 451
ZNF536 zinc finger protein 536
ZNF876P zinc finger protein 876, pseudogene
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZSCAN4 zinc finger and SCAN domain containing 4