Brain Lower Grade Glioma_LGG_TCGA-DB-A64S-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

133 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64S-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ACAD8 acyl-CoA dehydrogenase family, member 8
ACKR1 atypical chemokine receptor 1 (Duffy blood group)
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ACTRT2 actin-related protein T2
ADGRG7 adhesion G protein-coupled receptor G7
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
AQP7P3 aquaporin 7 pseudogene 3
ASAH1 N-acylsphingosine amidohydrolase (acid ceramidase) 1
C1QL4 complement component 1, q subcomponent-like 4
C2 complement component 2
C3ORF35 chromosome 3 open reading frame 35
C6ORF10 chromosome 6 open reading frame 10
C7ORF71 chromosome 7 open reading frame 71
CCDC155 coiled-coil domain containing 155
CCDC85C coiled-coil domain containing 85C
CCL19 chemokine (C-C motif) ligand 19
CD14 CD14 molecule
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21
CH25H cholesterol 25-hydroxylase
CMPK1 cytidine monophosphate (UMP-CMP) kinase 1, cytosolic
COX18 COX18 cytochrome c oxidase assembly factor
COX8C cytochrome c oxidase subunit VIIIC
CXORF21 chromosome X open reading frame 21
CYFIP1 cytoplasmic FMR1 interacting protein 1
CYP3A43 cytochrome P450, family 3, subfamily A, polypeptide 43
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
DCK deoxycytidine kinase
EGR3 early growth response 3
ENOSF1 enolase superfamily member 1
ENPP7 ectonucleotide pyrophosphatase/phosphodiesterase 7
FAM182A family with sequence similarity 182, member A
FAM95B1 family with sequence similarity 95, member B1
FCGR1C Fc fragment of IgG, high affinity Ic, receptor (CD64), pseudogene
FFAR1 free fatty acid receptor 1
FMR1NB fragile X mental retardation 1 neighbor
FPR1 formyl peptide receptor 1
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GH1 growth hormone 1
GLIPR2 GLI pathogenesis-related 2
GLUD1 glutamate dehydrogenase 1
HERC2P2 hect domain and RLD 2 pseudogene 2
HES3 hes family bHLH transcription factor 3
HIBCH 3-hydroxyisobutyryl-CoA hydrolase
HIST1H2BI histone cluster 1, H2bi
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
ID2B inhibitor of DNA binding 2B, dominant negative helix-loop-helix protein (pseudogene)
IFNK interferon, kappa
IL10 interleukin 10
IL12A interleukin 12A
IL1B interleukin 1, beta
IL27 interleukin 27
JDP2 Jun dimerization protein 2
JRKL JRK-like
KDM4E lysine (K)-specific demethylase 4E
KLRF1 killer cell lectin-like receptor subfamily F, member 1
LINC00114 long intergenic non-protein coding RNA 114
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC400794 uncharacterized LOC400794
LOC644145 exocyst complex component 1 pseudogene
LOC644936 actin, beta pseudogene
MAP3K8 mitogen-activated protein kinase kinase kinase 8
MAT2A methionine adenosyltransferase II, alpha
MCL1 myeloid cell leukemia 1
MSLN mesothelin
NADK2 NAD kinase 2, mitochondrial
NAPSB napsin B aspartic peptidase, pseudogene
NEURL2 neuralized E3 ubiquitin protein ligase 2
NFKBID nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, delta
NLRC3 NLR family, CARD domain containing 3
NLRP3 NLR family, pyrin domain containing 3
NXF2B nuclear RNA export factor 2B
OR10G4 olfactory receptor, family 10, subfamily G, member 4
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR8J1 olfactory receptor, family 8, subfamily J, member 1
OSM oncostatin M
PCCA propionyl CoA carboxylase, alpha polypeptide
PDE8A phosphodiesterase 8A
PDGFB platelet-derived growth factor beta polypeptide
PDZK1P1 PDZ domain containing 1 pseudogene 1
PER3 period circadian clock 3
PLCB2 phospholipase C, beta 2
PMM1 phosphomannomutase 1
PPA2 pyrophosphatase (inorganic) 2
PPP2R5A protein phosphatase 2, regulatory subunit B', alpha
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PRR5L proline rich 5 like
PUS10 pseudouridylate synthase 10
RAB12 RAB12, member RAS oncogene family
RET ret proto-oncogene
RFPL3 ret finger protein-like 3
RGS1 regulator of G-protein signaling 1
RHPN2 rhophilin, Rho GTPase binding protein 2
RMDN1 regulator of microtubule dynamics 1
RPE65 retinal pigment epithelium-specific protein 65kDa
RRAGB Ras-related GTP binding B
SCIN scinderin
SCT secretin
SEPT12 septin 12
SERPINB9 serpin peptidase inhibitor, clade B (ovalbumin), member 9
SFTPA2 surfactant protein A2
SGK1 serum/glucocorticoid regulated kinase 1
SH3BGRL SH3 domain binding glutamate-rich protein like
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SNORA14A small nucleolar RNA, H/ACA box 14A
SOX3 SRY (sex determining region Y)-box 3
SPATA25 spermatogenesis associated 25
SPDYC speedy/RINGO cell cycle regulator family member C
SRGN serglycin
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SUMO1P1 SUMO1 pseudogene 1
TANGO2 transport and golgi organization 2 homolog (Drosophila)
TAS2R42 taste receptor, type 2, member 42
TEX36 testis expressed 36
THEMIS2 thymocyte selection associated family member 2
TIGD2 tigger transposable element derived 2
TMEM126B transmembrane protein 126B
TMEM211 transmembrane protein 211
TMEM95 transmembrane protein 95
TMPRSS13 transmembrane protease, serine 13
TNFRSF1B tumor necrosis factor receptor superfamily, member 1B
TOB2 transducer of ERBB2, 2
TRIM63 tripartite motif containing 63, E3 ubiquitin protein ligase
TSPAN3 tetraspanin 3
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TTTY6 testis-specific transcript, Y-linked 6 (non-protein coding)
UCP2 uncoupling protein 2 (mitochondrial, proton carrier)
ZIC3 Zic family member 3
ZRANB2 zinc finger, RAN-binding domain containing 2

low expression

Symbol Name
CCDC174 coiled-coil domain containing 174
LOC728024 chromosome X open reading frame 56 pseudogene
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria