Brain Lower Grade Glioma_LGG_TCGA-DB-A64R-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

270 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64R-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ACAD10 acyl-CoA dehydrogenase family, member 10
ADA adenosine deaminase
AKAP4 A kinase (PRKA) anchor protein 4
AMT aminomethyltransferase
AMZ1 archaelysin family metallopeptidase 1
ANGEL1 angel homolog 1 (Drosophila)
ANO8 anoctamin 8
AOX2P aldehyde oxidase 2 pseudogene
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
ARL4A ADP-ribosylation factor-like 4A
ARMC8 armadillo repeat containing 8
ASB14 ankyrin repeat and SOCS box containing 14
ASB15 ankyrin repeat and SOCS box containing 15
ASIC1 acid sensing (proton gated) ion channel 1
ATCAY ataxia, cerebellar, Cayman type
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
BCHE butyrylcholinesterase
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BIVM basic, immunoglobulin-like variable motif containing
BMP2 bone morphogenetic protein 2
BMPER BMP binding endothelial regulator
BRINP3 bone morphogenetic protein/retinoic acid inducible neural-specific 3
C15ORF39 chromosome 15 open reading frame 39
C15ORF62 chromosome 15 open reading frame 62
C16ORF90 chromosome 16 open reading frame 90
C17ORF100 chromosome 17 open reading frame 100
C17ORF50 chromosome 17 open reading frame 50
C1ORF21 chromosome 1 open reading frame 21
C1ORF220 chromosome 1 open reading frame 220
C20ORF144 chromosome 20 open reading frame 144
C2ORF27A chromosome 2 open reading frame 27A
C3ORF70 chromosome 3 open reading frame 70
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CAMSAP3 calmodulin regulated spectrin-associated protein family, member 3
CASKIN2 CASK interacting protein 2
CBR4 carbonyl reductase 4
CCDC79 coiled-coil domain containing 79
CD1D CD1d molecule
CDH10 cadherin 10, type 2 (T2-cadherin)
CDH23 cadherin-related 23
CDHR1 cadherin-related family member 1
CERKL ceramide kinase-like
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal)
CLEC2D C-type lectin domain family 2, member D
CLEC4F C-type lectin domain family 4, member F
CNTN6 contactin 6
COG2 component of oligomeric golgi complex 2
COL9A1 collagen, type IX, alpha 1
CORO7 coronin 7
CSMD1 CUB and Sushi multiple domains 1
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CXADR coxsackie virus and adenovirus receptor
CXADRP2 coxsackie virus and adenovirus receptor pseudogene 2
DACH1 dachshund family transcription factor 1
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
DEFA6 defensin, alpha 6, Paneth cell-specific
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6
DGCR9 DiGeorge syndrome critical region gene 9 (non-protein coding)
DKFZP434L187 uncharacterized LOC26082
DPPA5 developmental pluripotency associated 5
DSEL dermatan sulfate epimerase-like
DUSP19 dual specificity phosphatase 19
EBF4 early B-cell factor 4
ELFN2 extracellular leucine-rich repeat and fibronectin type III domain containing 2
EPN2 epsin 2
ETV5 ets variant 5
EVI5L ecotropic viral integration site 5-like
FAM155A family with sequence similarity 155, member A
FAM166A family with sequence similarity 166, member A
FAM205A family with sequence similarity 205, member A
FAM218A family with sequence similarity 218, member A
FIGLA folliculogenesis specific basic helix-loop-helix
FLJ10038 uncharacterized protein FLJ10038
FMR1NB fragile X mental retardation 1 neighbor
FRMPD1 FERM and PDZ domain containing 1
GAL3ST1 galactose-3-O-sulfotransferase 1
GALNT14 polypeptide N-acetylgalactosaminyltransferase 14
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GFRA1 GDNF family receptor alpha 1
GK5 glycerol kinase 5 (putative)
GLIS2 GLIS family zinc finger 2
GOLGA6C golgin A6 family, member C
GOLGA8A golgin A8 family, member A
GOLGA8B golgin A8 family, member B
GPM6A glycoprotein M6A
GPR45 G protein-coupled receptor 45
GRAMD2 GRAM domain containing 2
GRID1 glutamate receptor, ionotropic, delta 1
HDAC4 histone deacetylase 4
HERC2P4 hect domain and RLD 2 pseudogene 4
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HIST3H3 histone cluster 3, H3
HS6ST2 heparan sulfate 6-O-sulfotransferase 2
HSF2BP heat shock transcription factor 2 binding protein
INSM2 insulinoma-associated 2
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
KATNBL1 katanin p80 subunit B-like 1
KCNIP3 Kv channel interacting protein 3, calsenilin
KCNK3 potassium channel, two pore domain subfamily K, member 3
KIAA1644 KIAA1644
KIF3A kinesin family member 3A
KLF12 Kruppel-like factor 12
KLHL31 kelch-like family member 31
KSR1 kinase suppressor of ras 1
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LHX5 LIM homeobox 5
LINC00161 long intergenic non-protein coding RNA 161
LINC00176 long intergenic non-protein coding RNA 176
LINC00319 long intergenic non-protein coding RNA 319
LOC100128288 uncharacterized LOC100128288
LOC285696 uncharacterized LOC285696
LPPR1 lipid phosphate phosphatase-related protein type 1
LRIT2 leucine-rich repeat, immunoglobulin-like and transmembrane domains 2
LRP5 low density lipoprotein receptor-related protein 5
LRRC19 leucine rich repeat containing 19
LRRC75B leucine rich repeat containing 75B
LRRN1 leucine rich repeat neuronal 1
LRRTM3 leucine rich repeat transmembrane neuronal 3
LY6G6F lymphocyte antigen 6 complex, locus G6F
MAGEA5 melanoma antigen family A5
MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1
MB21D2 Mab-21 domain containing 2
MBD3L5 methyl-CpG binding domain protein 3-like 5
MC2R melanocortin 2 receptor (adrenocorticotropic hormone)
MCMDC2 minichromosome maintenance domain containing 2
MCTS1 malignant T cell amplified sequence 1
MICAL1 microtubule associated monooxygenase, calponin and LIM domain containing 1
MSX2P1 msh homeobox 2 pseudogene 1
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYT1 myelin transcription factor 1
NEURL1B neuralized E3 ubiquitin protein ligase 1B
NHSL1 NHS-like 1
NLGN3 neuroligin 3
NMU neuromedin U
NOG noggin
NOTCH1 notch 1
NRDE2 NRDE-2, necessary for RNA interference, domain containing
NRXN1 neurexin 1
NTN4 netrin 4
NUP210 nucleoporin 210kDa
NUP35 nucleoporin 35kDa
NXPH1 neurexophilin 1
OR56B1 olfactory receptor, family 56, subfamily B, member 1
PAGE2B P antigen family, member 2B
PCDH20 protocadherin 20
PCDHA4 protocadherin alpha 4
PCDHB10 protocadherin beta 10
PCDHB17P protocadherin beta 17 pseudogene
PCDHGA1 protocadherin gamma subfamily A, 1
PCDHGB5 protocadherin gamma subfamily B, 5
PCDHGB6 protocadherin gamma subfamily B, 6
PCGF3 polycomb group ring finger 3
PDC phosducin
PELI2 pellino E3 ubiquitin protein ligase family member 2
PHLDA1 pleckstrin homology-like domain, family A, member 1
PIWIL3 piwi-like RNA-mediated gene silencing 3
PKD2L2 polycystic kidney disease 2-like 2
PLEKHH2 pleckstrin homology domain containing, family H (with MyTH4 domain) member 2
POMGNT2 protein O-linked mannose N-acetylglucosaminyltransferase 2 (beta 1,4-)
PPBPP2 pro-platelet basic protein pseudogene 2
PPP1R10 protein phosphatase 1, regulatory subunit 10
PRKG2 protein kinase, cGMP-dependent, type II
PRODH2 proline dehydrogenase (oxidase) 2
PRR25 proline rich 25
PTGIS prostaglandin I2 (prostacyclin) synthase
RAB14 RAB14, member RAS oncogene family
RAB2A RAB2A, member RAS oncogene family
RAI1 retinoic acid induced 1
RANBP17 RAN binding protein 17
RBSN rabenosyn, RAB effector
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RCCD1 RCC1 domain containing 1
RGMB repulsive guidance molecule family member b
RGR retinal G protein coupled receptor
RIN2 Ras and Rab interactor 2
RNF146 ring finger protein 146
RNF222 ring finger protein 222
RRAGB Ras-related GTP binding B
SAMD5 sterile alpha motif domain containing 5
SAXO2 stabilizer of axonemal microtubules 2
SCARB2 scavenger receptor class B, member 2
SCD5 stearoyl-CoA desaturase 5
SERPINA10 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 10
SEZ6 seizure related 6 homolog (mouse)
SGK1 serum/glucocorticoid regulated kinase 1
SGSM1 small G protein signaling modulator 1
SH2D3A SH2 domain containing 3A
SH3BP4 SH3-domain binding protein 4
SHROOM2 shroom family member 2
SLC10A1 solute carrier family 10 (sodium/bile acid cotransporter), member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
SLC26A1 solute carrier family 26 (anion exchanger), member 1
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLC8A3 solute carrier family 8 (sodium/calcium exchanger), member 3
SLITRK3 SLIT and NTRK-like family, member 3
SMAD7 SMAD family member 7
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMPD3 sphingomyelin phosphodiesterase 3, neutral membrane (neutral sphingomyelinase II)
SMR3A submaxillary gland androgen regulated protein 3A
SNCAIP synuclein, alpha interacting protein
SNX14 sorting nexin 14
SNX31 sorting nexin 31
SOX8 SRY (sex determining region Y)-box 8
SP7 Sp7 transcription factor
SPATA25 spermatogenesis associated 25
SPHKAP SPHK1 interactor, AKAP domain containing
SPSB4 splA/ryanodine receptor domain and SOCS box containing 4
SRI sorcin
SSPO SCO-spondin
SSTR1 somatostatin receptor 1
SSTR2 somatostatin receptor 2
STX6 syntaxin 6
TAAR6 trace amine associated receptor 6
TACC2 transforming, acidic coiled-coil containing protein 2
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAS2R19 taste receptor, type 2, member 19
TAS2R30 taste receptor, type 2, member 30
TAS2R43 taste receptor, type 2, member 43
TBC1D14 TBC1 domain family, member 14
TBC1D29 TBC1 domain family, member 29
TBC1D32 TBC1 domain family, member 32
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TCTE3 t-complex-associated-testis-expressed 3
TEX33 testis expressed 33
TMEM196 transmembrane protein 196
TMEM211 transmembrane protein 211
TMEM249 transmembrane protein 249
TMEM257 transmembrane protein 257
TMEM41B transmembrane protein 41B
TMEM97 transmembrane protein 97
TNK2 tyrosine kinase, non-receptor, 2
TRAM1L1 translocation associated membrane protein 1-like 1
TRIB2 tribbles pseudokinase 2
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TRPC3 transient receptor potential cation channel, subfamily C, member 3
TSIX TSIX transcript, XIST antisense RNA
TTC14 tetratricopeptide repeat domain 14
TTLL8 tubulin tyrosine ligase-like family member 8
U2SURP U2 snRNP-associated SURP domain containing
UBA5 ubiquitin-like modifier activating enzyme 5
ULK4P3 ULK4 pseudogene 3
UMODL1-AS1 UMODL1 antisense RNA 1
UNKL unkempt family zinc finger-like
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa
WDFY1 WD repeat and FYVE domain containing 1
ZBTB24 zinc finger and BTB domain containing 24
ZC3H12B zinc finger CCCH-type containing 12B
ZC3H7A zinc finger CCCH-type containing 7A
ZCCHC24 zinc finger, CCHC domain containing 24
ZDHHC22 zinc finger, DHHC-type containing 22
ZFP2 ZFP2 zinc finger protein
ZFR2 zinc finger RNA binding protein 2
ZKSCAN7 zinc finger with KRAB and SCAN domains 7
ZNF189 zinc finger protein 189
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF276 zinc finger protein 276
ZNF333 zinc finger protein 333
ZNF493 zinc finger protein 493
ZNF514 zinc finger protein 514
ZNF595 zinc finger protein 595
ZNF624 zinc finger protein 624
ZNF674 zinc finger protein 674

low expression

Symbol Name
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)