Brain Lower Grade Glioma_LGG_TCGA-DB-A64L-01A-11R-A29R-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

420 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A64L-01A-11R-A29R-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC13 ATP-binding cassette, sub-family C (CFTR/MRP), member 13, pseudogene
ABCG8 ATP-binding cassette, sub-family G (WHITE), member 8
ABHD6 abhydrolase domain containing 6
ACBD3 acyl-CoA binding domain containing 3
ACTL7A actin-like 7A
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ACTRT1 actin-related protein T1
ADAM5 ADAM metallopeptidase domain 5 (pseudogene)
ADGRF3 adhesion G protein-coupled receptor F3
ADGRG3 adhesion G protein-coupled receptor G3
AFTPH aftiphilin
AHSP alpha hemoglobin stabilizing protein
ALAS2 5'-aminolevulinate synthase 2
ALKBH8 alkB, alkylation repair homolog 8 (E. coli)
ANAPC13 anaphase promoting complex subunit 13
ANKRA2 ankyrin repeat, family A (RFXANK-like), 2
ANKRD49 ankyrin repeat domain 49
ANO5 anoctamin 5
AP1AR adaptor-related protein complex 1 associated regulatory protein
API5 apoptosis inhibitor 5
APOA1 apolipoprotein A-I
APOA5 apolipoprotein A-V
APOBEC3A apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3A
AQP10 aquaporin 10
AQP6 aquaporin 6, kidney specific
AQP8 aquaporin 8
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ASPDH aspartate dehydrogenase domain containing
ATOH8 atonal homolog 8 (Drosophila)
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3
AZI2 5-azacytidine induced 2
BAALC-AS2 BAALC antisense RNA 2
BEND2 BEN domain containing 2
BEST3 bestrophin 3
BLOC1S6 biogenesis of lysosomal organelles complex-1, subunit 6, pallidin
BOD1 biorientation of chromosomes in cell division 1
BPI bactericidal/permeability-increasing protein
BPIFB6 BPI fold containing family B, member 6
BTG1 B-cell translocation gene 1, anti-proliferative
C11ORF1 chromosome 11 open reading frame 1
C11ORF49 chromosome 11 open reading frame 49
C15ORF62 chromosome 15 open reading frame 62
C16ORF70 chromosome 16 open reading frame 70
C17ORF75 chromosome 17 open reading frame 75
C1ORF43 chromosome 1 open reading frame 43
C22ORF24 chromosome 22 open reading frame 24
C2CD4B C2 calcium-dependent domain containing 4B
C2ORF42 chromosome 2 open reading frame 42
C4ORF29 chromosome 4 open reading frame 29
CA1 carbonic anhydrase I
CABP5 calcium binding protein 5
CAMLG calcium modulating ligand
CATSPER3 cation channel, sperm associated 3
CCDC142 coiled-coil domain containing 142
CCDC144NL coiled-coil domain containing 144 family, N-terminal like
CCDC62 coiled-coil domain containing 62
CCNDBP1 cyclin D-type binding-protein 1
CCNG2 cyclin G2
CCNL1 cyclin L1
CCR6 chemokine (C-C motif) receptor 6
CCSER1 coiled-coil serine-rich protein 1
CCT4 chaperonin containing TCP1, subunit 4 (delta)
CCT8 chaperonin containing TCP1, subunit 8 (theta)
CDC40 cell division cycle 40
CDKN2AIP CDKN2A interacting protein
CDRT15 CMT1A duplicated region transcript 15
CDX1 caudal type homeobox 1
CEACAM3 carcinoembryonic antigen-related cell adhesion molecule 3
CEACAM8 carcinoembryonic antigen-related cell adhesion molecule 8
CEBPZ CCAAT/enhancer binding protein (C/EBP), zeta
CENPC centromere protein C
CEP290 centrosomal protein 290kDa
CHCHD4 coiled-coil-helix-coiled-coil-helix domain containing 4
CHRND cholinergic receptor, nicotinic, delta (muscle)
CKMT1A creatine kinase, mitochondrial 1A
CLDN25 claudin 25
CLEC4D C-type lectin domain family 4, member D
CLEC4GP1 C-type lectin domain family 4, member G pseudogene 1
CMKLR1 chemerin chemokine-like receptor 1
CNST consortin, connexin sorting protein
COG1 component of oligomeric golgi complex 1
COG2 component of oligomeric golgi complex 2
COL4A3BP collagen, type IV, alpha 3 (Goodpasture antigen) binding protein
COPS2 COP9 signalosome subunit 2
COPS8 COP9 signalosome subunit 8
COX18 COX18 cytochrome c oxidase assembly factor
CPB1 carboxypeptidase B1 (tissue)
CRISP3 cysteine-rich secretory protein 3
CST1 cystatin SN
CST4 cystatin S
CST5 cystatin D
CSTL1 cystatin-like 1
CT45A2 cancer/testis antigen family 45, member A2
CT45A4 cancer/testis antigen family 45, member A4
CT45A5 cancer/testis antigen family 45, member A5
CTXN3 cortexin 3
CUL5 cullin 5
CXCR1 chemokine (C-X-C motif) receptor 1
CXCR2 chemokine (C-X-C motif) receptor 2
CXORF57 chromosome X open reading frame 57
CYP4Z1 cytochrome P450, family 4, subfamily Z, polypeptide 1
DDO D-aspartate oxidase
DDX18 DEAD (Asp-Glu-Ala-Asp) box polypeptide 18
DDX55 DEAD (Asp-Glu-Ala-Asp) box polypeptide 55
DET1 de-etiolated homolog 1 (Arabidopsis)
DGAT2 diacylglycerol O-acyltransferase 2
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DISC2 disrupted in schizophrenia 2 (non-protein coding)
DLAT dihydrolipoamide S-acetyltransferase
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DUSP28 dual specificity phosphatase 28
DUSP4 dual specificity phosphatase 4
DUSP5 dual specificity phosphatase 5
DUSP9 dual specificity phosphatase 9
EIF1 eukaryotic translation initiation factor 1
EIF1AD eukaryotic translation initiation factor 1A domain containing
EIF2A eukaryotic translation initiation factor 2A, 65kDa
EIF3M eukaryotic translation initiation factor 3, subunit M
EIF4A2 eukaryotic translation initiation factor 4A2
ELK1 ELK1, member of ETS oncogene family
EPB42 erythrocyte membrane protein band 4.2
EPM2AIP1 EPM2A (laforin) interacting protein 1
EPRS glutamyl-prolyl-tRNA synthetase
EXOC8 exocyst complex component 8
FAF2 Fas associated factor family member 2
FAM129C family with sequence similarity 129, member C
FAM157A family with sequence similarity 157, member A
FAM160A2 family with sequence similarity 160, member A2
FAM174B family with sequence similarity 174, member B
FAM185A family with sequence similarity 185, member A
FAM218A family with sequence similarity 218, member A
FASTKD2 FAST kinase domains 2
FCGR3B Fc fragment of IgG, low affinity IIIb, receptor (CD16b)
FCRLB Fc receptor-like B
FFAR2 free fatty acid receptor 2
FGF14 fibroblast growth factor 14
FKSG29 FKSG29
FLJ41941 uncharacterized LOC100192420
FLJ45079 FLJ45079 protein
FNIP1 folliculin interacting protein 1
FOPNL FGFR1OP N-terminal like
FXR2 fragile X mental retardation, autosomal homolog 2
G6PC2 glucose-6-phosphatase, catalytic, 2
GALR3 galanin receptor 3
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GFM2 G elongation factor, mitochondrial 2
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GLT6D1 glycosyltransferase 6 domain containing 1
GMCL1P1 germ cell-less, spermatogenesis associated 1 pseudogene 1
GOLGA3 golgin A3
GOPC golgi-associated PDZ and coiled-coil motif containing
GOSR1 golgi SNAP receptor complex member 1
GPR150 G protein-coupled receptor 150
GPR180 G protein-coupled receptor 180
GPR6 G protein-coupled receptor 6
GRAMD1B GRAM domain containing 1B
GRPEL1 GrpE-like 1, mitochondrial (E. coli)
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
GYPA glycophorin A (MNS blood group)
GYPB glycophorin B (MNS blood group)
GZMB granzyme B (granzyme 2, cytotoxic T-lymphocyte-associated serine esterase 1)
HAL histidine ammonia-lyase
HAND1 heart and neural crest derivatives expressed 1
HAP1 huntingtin-associated protein 1
HBA1 hemoglobin, alpha 1
HBA2 hemoglobin, alpha 2
HBB hemoglobin, beta
HBD hemoglobin, delta
HBG1 hemoglobin, gamma A
HBG2 hemoglobin, gamma G
HBM hemoglobin, mu
HCAR3 hydroxycarboxylic acid receptor 3
HCG4 HLA complex group 4 (non-protein coding)
HEMGN hemogen
HHLA1 HERV-H LTR-associating 1
HINFP histone H4 transcription factor
HSP90AB1 heat shock protein 90kDa alpha (cytosolic), class B member 1
HSPA9 heat shock 70kDa protein 9 (mortalin)
HYAL3 hyaluronoglucosaminidase 3
HYLS1 hydrolethalus syndrome 1
HYMAI hydatidiform mole associated and imprinted (non-protein coding)
IDI2-AS1 IDI2 antisense RNA 1
IFIT1B interferon-induced protein with tetratricopeptide repeats 1B
IFNA14 interferon, alpha 14
IL18RAP interleukin 18 receptor accessory protein
INTS7 integrator complex subunit 7
IPO5 importin 5
IQCB1 IQ motif containing B1
IQCJ IQ motif containing J
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
JADE2 jade family PHD finger 2
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNJ15 potassium channel, inwardly rectifying subfamily J, member 15
KCNMB2 potassium channel subfamily M regulatory beta subunit 2
KDM8 lysine (K)-specific demethylase 8
KIAA1755 KIAA1755
KLK2 kallikrein-related peptidase 2
KLK3 kallikrein-related peptidase 3
KRT3 keratin 3, type II
KRTAP5-8 keratin associated protein 5-8
KRTAP5-9 keratin associated protein 5-9
LCMT2 leucine carboxyl methyltransferase 2
LEMD3 LEM domain containing 3
LETMD1 LETM1 domain containing 1
LIM2 lens intrinsic membrane protein 2, 19kDa
LIN7C lin-7 homolog C (C. elegans)
LINGO4 leucine rich repeat and Ig domain containing 4
LINS lines homolog (Drosophila)
LMO3 LIM domain only 3 (rhombotin-like 2)
LOC100132215 uncharacterized LOC100132215
LOC100133985 uncharacterized LOC100133985
LOC284023 uncharacterized LOC284023
LOC643486
LRP11 low density lipoprotein receptor-related protein 11
LRP4 low density lipoprotein receptor-related protein 4
LRPPRC leucine-rich pentatricopeptide repeat containing
LRRC49 leucine rich repeat containing 49
LRRIQ4 leucine-rich repeats and IQ motif containing 4
LRRTM2 leucine rich repeat transmembrane neuronal 2
LSG1 large 60S subunit nuclear export GTPase 1
LTN1 listerin E3 ubiquitin protein ligase 1
LYRM7 LYR motif containing 7
LYSMD1 LysM, putative peptidoglycan-binding, domain containing 1
MAK16 MAK16 homolog (S. cerevisiae)
MBLAC2 metallo-beta-lactamase domain containing 2
MEFV Mediterranean fever
METTL15 methyltransferase like 15
METTL16 methyltransferase like 16
METTL18 methyltransferase like 18
MFSD8 major facilitator superfamily domain containing 8
MGLL monoglyceride lipase
MPHOSPH10 M-phase phosphoprotein 10 (U3 small nucleolar ribonucleoprotein)
MPZL3 myelin protein zero-like 3
MRS2 MRS2 magnesium transporter
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
MT4 metallothionein 4
MTFMT mitochondrial methionyl-tRNA formyltransferase
MUT methylmalonyl CoA mutase
MYBPHL myosin binding protein H-like
MYL4 myosin, light chain 4, alkali; atrial, embryonic
MYT1 myelin transcription factor 1
MZT1 mitotic spindle organizing protein 1
NARS2 asparaginyl-tRNA synthetase 2, mitochondrial (putative)
NECAP1 NECAP endocytosis associated 1
NEUROD4 neuronal differentiation 4
NFE2 nuclear factor, erythroid 2
NFXL1 nuclear transcription factor, X-box binding-like 1
NOP58 NOP58 ribonucleoprotein
NPC1L1 NPC1-like 1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPPA natriuretic peptide A
NR0B2 nuclear receptor subfamily 0, group B, member 2
NRN1 neuritin 1
NSUN3 NOP2/Sun domain family, member 3
NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6
NUP160 nucleoporin 160kDa
NUPL1 nucleoporin like 1
NUS1 nuclear undecaprenyl pyrophosphate synthase 1 homolog (S. cerevisiae)
OCIAD1 OCIA domain containing 1
OLA1 Obg-like ATPase 1
OR2T6 olfactory receptor, family 2, subfamily T, member 6
OR56B4 olfactory receptor, family 56, subfamily B, member 4
OR8U1 olfactory receptor, family 8, subfamily U, member 1
ORC3 origin recognition complex, subunit 3
ORC4 origin recognition complex, subunit 4
OSER1 oxidative stress responsive serine-rich 1
PCDHA3 protocadherin alpha 3
PCDHA5 protocadherin alpha 5
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGA2 protocadherin gamma subfamily A, 2
PCID2 PCI domain containing 2
PDE12 phosphodiesterase 12
PDHX pyruvate dehydrogenase complex, component X
PDILT protein disulfide isomerase-like, testis expressed
PEX11B peroxisomal biogenesis factor 11 beta
PF4 platelet factor 4
PGLYRP1 peptidoglycan recognition protein 1
PHGR1 proline/histidine/glycine-rich 1
PHOSPHO1 phosphatase, orphan 1
PLAC1 placenta-specific 1
PLEKHA3 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 3
PLGLB2 plasminogen-like B2
POLR3F polymerase (RNA) III (DNA directed) polypeptide F, 39 kDa
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PROK2 prokineticin 2
PRPF4 pre-mRNA processing factor 4
PRR30 proline rich 30
PSKH2 protein serine kinase H2
PTCD2 pentatricopeptide repeat domain 2
RAD17 RAD17 homolog (S. pombe)
RANBP10 RAN binding protein 10
REG4 regenerating islet-derived family, member 4
RFPL3 ret finger protein-like 3
RHCE Rh blood group, CcEe antigens
RIOK2 RIO kinase 2
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae)
RNF112 ring finger protein 112
RNGTT RNA guanylyltransferase and 5'-phosphatase
RORC RAR-related orphan receptor C
RPL23AP53 ribosomal protein L23a pseudogene 53
RPP14 ribonuclease P/MRP 14kDa subunit
RPRML reprimo-like
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6
RPUSD4 RNA pseudouridylate synthase domain containing 4
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
RSL1D1 ribosomal L1 domain containing 1
S100A12 S100 calcium binding protein A12
S100A8 S100 calcium binding protein A8
S100P S100 calcium binding protein P
SAG S-antigen; retina and pineal gland (arrestin)
SCGB1A1 secretoglobin, family 1A, member 1 (uteroglobin)
SCML1 sex comb on midleg-like 1 (Drosophila)
SDAD1 SDA1 domain containing 1
SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
SENP2 SUMO1/sentrin/SMT3 specific peptidase 2
SH3BP5L SH3-binding domain protein 5-like
SIRT5 sirtuin 5
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
SLC25A38 solute carrier family 25, member 38
SLC25A51 solute carrier family 25, member 51
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC30A9 solute carrier family 30 (zinc transporter), member 9
SLC35A5 solute carrier family 35, member A5
SLC35E1 solute carrier family 35, member E1
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group)
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2
SLCO4C1 solute carrier organic anion transporter family, member 4C1
SLIT1 slit homolog 1 (Drosophila)
SNHG8 small nucleolar RNA host gene 8
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA71A small nucleolar RNA, H/ACA box 71A
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORD1C small nucleolar RNA, C/D box 1C
SNRNP48 small nuclear ribonucleoprotein 48kDa (U11/U12)
SOSTDC1 sclerostin domain containing 1
SPACA3 sperm acrosome associated 3
SPATA19 spermatogenesis associated 19
SPATA20 spermatogenesis associated 20
SPATA9 spermatogenesis associated 9
STEAP2 STEAP family member 2, metalloreductase
SYNPO2L synaptopodin 2-like
SYT14 synaptotagmin XIV
TAF1A TATA box binding protein (TBP)-associated factor, RNA polymerase I, A, 48kDa
TAF1D TATA box binding protein (TBP)-associated factor, RNA polymerase I, D, 41kDa
TARS2 threonyl-tRNA synthetase 2, mitochondrial (putative)
TARSL2 threonyl-tRNA synthetase-like 2
TATDN3 TatD DNase domain containing 3
TBC1D32 TBC1 domain family, member 32
TCEAL1 transcription elongation factor A (SII)-like 1
TCL1A T-cell leukemia/lymphoma 1A
TCP1 t-complex 1
TDRD6 tudor domain containing 6
TDRKH tudor and KH domain containing
TFB2M transcription factor B2, mitochondrial
TFF1 trefoil factor 1
TGDS TDP-glucose 4,6-dehydratase
THAP10 THAP domain containing 10
THAP9 THAP domain containing 9
THEM4 thioesterase superfamily member 4
THUMPD1 THUMP domain containing 1
TMCC2 transmembrane and coiled-coil domain family 2
TMEM116 transmembrane protein 116
TMEM161B transmembrane protein 161B
TMEM18 transmembrane protein 18
TMEM192 transmembrane protein 192
TMEM244 transmembrane protein 244
TMEM252 transmembrane protein 252
TMEM40 transmembrane protein 40
TMEM41B transmembrane protein 41B
TMEM63C transmembrane protein 63C
TMIGD2 transmembrane and immunoglobulin domain containing 2
TMX2 thioredoxin-related transmembrane protein 2
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4
TOMM70A translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae)
TRIM10 tripartite motif containing 10
TRIM23 tripartite motif containing 23
TRIQK triple QxxK/R motif containing
TRMT11 tRNA methyltransferase 11 homolog (S. cerevisiae)
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TRPC7 transient receptor potential cation channel, subfamily C, member 7
TSEN2 TSEN2 tRNA splicing endonuclease subunit
TSHB thyroid stimulating hormone, beta
TSPYL2 TSPY-like 2
TUBA3D tubulin, alpha 3d
TUBB7P tubulin, beta 7, pseudogene
TUT1 terminal uridylyl transferase 1, U6 snRNA-specific
UFM1 ubiquitin-fold modifier 1
USPL1 ubiquitin specific peptidase like 1
VNN3 vanin 3
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
WNT8A wingless-type MMTV integration site family, member 8A
WSCD2 WSC domain containing 2
XRCC5 X-ray repair complementing defective repair in Chinese hamster cells 5 (double-strand-break rejoining)
ZBTB3 zinc finger and BTB domain containing 3
ZBTB9 zinc finger and BTB domain containing 9
ZFAND1 zinc finger, AN1-type domain 1
ZNF10 zinc finger protein 10
ZNF136 zinc finger protein 136
ZNF215 zinc finger protein 215
ZNF263 zinc finger protein 263
ZNF337 zinc finger protein 337
ZNF502 zinc finger protein 502
ZNF654 zinc finger protein 654
ZNF747 zinc finger protein 747
ZNF75D zinc finger protein 75D
ZNF830 zinc finger protein 830
ZPBP2 zona pellucida binding protein 2
ZUFSP zinc finger with UFM1-specific peptidase domain

low expression

Symbol Name
CCDC71 coiled-coil domain containing 71
CDK5RAP2 CDK5 regulatory subunit associated protein 2
CUEDC1 CUE domain containing 1
OGG1 8-oxoguanine DNA glycosylase
PDCL phosducin-like
PSKH1 protein serine kinase H1
TTLL5 tubulin tyrosine ligase-like family member 5