Brain Lower Grade Glioma_LGG_TCGA-DB-A4XH-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

226 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XH-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAT2 acetyl-CoA acetyltransferase 2
ACSBG1 acyl-CoA synthetase bubblegum family member 1
ACSS2 acyl-CoA synthetase short-chain family member 2
ADGRF2 adhesion G protein-coupled receptor F2
ADGRF3 adhesion G protein-coupled receptor F3
ADH7 alcohol dehydrogenase 7 (class IV), mu or sigma polypeptide
ADORA2B adenosine A2b receptor
AMT aminomethyltransferase
ANKAR ankyrin and armadillo repeat containing
ANXA3 annexin A3
APOLD1 apolipoprotein L domain containing 1
ARMS2 age-related maculopathy susceptibility 2
ASRGL1 asparaginase like 1
ATP10A ATPase, class V, type 10A
AZI2 5-azacytidine induced 2
BBIP1 BBSome interacting protein 1
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BRINP2 bone morphogenetic protein/retinoic acid inducible neural-specific 2
BRMS1L breast cancer metastasis-suppressor 1-like
BSX brain-specific homeobox
BTNL3 butyrophilin-like 3
BTNL9 butyrophilin-like 9
C10ORF99 chromosome 10 open reading frame 99
C14ORF28 chromosome 14 open reading frame 28
C16ORF62 chromosome 16 open reading frame 62
C1ORF64 chromosome 1 open reading frame 64
C22ORF31 chromosome 22 open reading frame 31
C2CD4C C2 calcium-dependent domain containing 4C
C5ORF58 chromosome 5 open reading frame 58
CABLES1 Cdk5 and Abl enzyme substrate 1
CALML3 calmodulin-like 3
CALML5 calmodulin-like 5
CCDC83 coiled-coil domain containing 83
CDRT15 CMT1A duplicated region transcript 15
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
CPA5 carboxypeptidase A5
CPN1 carboxypeptidase N, polypeptide 1
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
CYP4B1 cytochrome P450, family 4, subfamily B, polypeptide 1
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
DHCR7 7-dehydrocholesterol reductase
DNAJB3 DnaJ (Hsp40) homolog, subfamily B, member 3
DNAJC4 DnaJ (Hsp40) homolog, subfamily C, member 4
DSG1 desmoglein 1
DZIP1 DAZ interacting zinc finger protein 1
EMX2 empty spiracles homeobox 2
EMX2OS EMX2 opposite strand/antisense RNA
EPAS1 endothelial PAS domain protein 1
ESPNP espin pseudogene
FABP5P3 fatty acid binding protein 5 pseudogene 3
FAM110B family with sequence similarity 110, member B
FAM177A1 family with sequence similarity 177, member A1
FAM179A family with sequence similarity 179, member A
FAM205BP transmembrane protein C9orf144B pseudogene
FBXO47 F-box protein 47
FBXW11 F-box and WD repeat domain containing 11
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FDPS farnesyl diphosphate synthase
FLG2 filaggrin family member 2
FLJ37201 tigger transposable element derived 2 pseudogene
FLT1 fms-related tyrosine kinase 1
FOXN1 forkhead box N1
GDF2 growth differentiation factor 2
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GLUD1 glutamate dehydrogenase 1
GLUD2 glutamate dehydrogenase 2
GPR21 G protein-coupled receptor 21
GPR27 G protein-coupled receptor 27
GRIA3 glutamate receptor, ionotropic, AMPA 3
GSTM1 glutathione S-transferase mu 1
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
HAPLN1 hyaluronan and proteoglycan link protein 1
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HES6 hes family bHLH transcription factor 6
HEYL hes-related family bHLH transcription factor with YRPW motif-like
HHLA2 HERV-H LTR-associating 2
HIGD2B HIG1 hypoxia inducible domain family, member 2B
HIST1H4K histone cluster 1, H4k
HMGCS1 3-hydroxy-3-methylglutaryl-CoA synthase 1 (soluble)
HMHB1 histocompatibility (minor) HB-1
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HYMAI hydatidiform mole associated and imprinted (non-protein coding)
IDI1 isopentenyl-diphosphate delta isomerase 1
IDI2-AS1 IDI2 antisense RNA 1
IFNA6 interferon, alpha 6
IFNK interferon, kappa
IL36RN interleukin 36 receptor antagonist
INSIG1 insulin induced gene 1
IQCF6 IQ motif containing F6
JPH3 junctophilin 3
KAT2B K(lysine) acetyltransferase 2B
KIF2B kinesin family member 2B
KIF5A kinesin family member 5A
KIF5B kinesin family member 5B
KIF5C kinesin family member 5C
KLHL13 kelch-like family member 13
KRT1 keratin 1, type II
KRT15 keratin 15, type I
KRT2 keratin 2, type II
KRT6B keratin 6B, type II
KRT6C keratin 6C, type II
KRTAP1-1 keratin associated protein 1-1
KRTDAP keratinocyte differentiation-associated protein
LCE1A late cornified envelope 1A
LCE2B late cornified envelope 2B
LCE3D late cornified envelope 3D
LCE3E late cornified envelope 3E
LCE6A late cornified envelope 6A
LHX2 LIM homeobox 2
LINC00652 long intergenic non-protein coding RNA 652
LINC01599 long intergenic non-protein coding RNA 1599
LRRC3B leucine rich repeat containing 3B
LSAMP limbic system-associated membrane protein
LYZL4 lysozyme-like 4
MAGEA5 melanoma antigen family A5
MAGEA9B melanoma antigen family A9B
MARC1 mitochondrial amidoxime reducing component 1
MARCH5 membrane-associated ring finger (C3HC4) 5
MCF2L2 MCF.2 cell line derived transforming sequence-like 2
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic
MFSD2A major facilitator superfamily domain containing 2A
MSMO1 methylsterol monooxygenase 1
MT1IP metallothionein 1I, pseudogene
MT4 metallothionein 4
MTSS1L metastasis suppressor 1-like
MTX2 metaxin 2
NET1 neuroepithelial cell transforming 1
NFYB nuclear transcription factor Y, beta
NHEJ1 nonhomologous end-joining factor 1
NPFFR1 neuropeptide FF receptor 1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NR1H4 nuclear receptor subfamily 1, group H, member 4
NSDHL NAD(P) dependent steroid dehydrogenase-like
OAZ2 ornithine decarboxylase antizyme 2
ODF1 outer dense fiber of sperm tails 1
OMD osteomodulin
OR2A4 olfactory receptor, family 2, subfamily A, member 4
OR2L13 olfactory receptor, family 2, subfamily L, member 13
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR2T2 olfactory receptor, family 2, subfamily T, member 2
OR2T27 olfactory receptor, family 2, subfamily T, member 27
OR2V2 olfactory receptor, family 2, subfamily V, member 2
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR9A4 olfactory receptor, family 9, subfamily A, member 4
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PANX2 pannexin 2
PASD1 PAS domain containing 1
PCBP3 poly(rC) binding protein 3
PCDHGA7 protocadherin gamma subfamily A, 7
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble)
PLEKHM2 pleckstrin homology domain containing, family M (with RUN domain) member 2
PLN phospholamban
PMEL premelanosome protein
POTED POTE ankyrin domain family, member D
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPP1R3G protein phosphatase 1, regulatory subunit 3G
PRAMEF14 PRAME family member 14
PRDM14 PR domain containing 14
PRR23B proline rich 23B
PRX periaxin
PSAPL1 prosaposin-like 1 (gene/pseudogene)
PSG4 pregnancy specific beta-1-glycoprotein 4
PSG5 pregnancy specific beta-1-glycoprotein 5
PTGDR2 prostaglandin D2 receptor 2
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4
RB1CC1 RB1-inducible coiled-coil 1
RGS20 regulator of G-protein signaling 20
RGS5 regulator of G-protein signaling 5
RIMS2 regulating synaptic membrane exocytosis 2
RNF103 ring finger protein 103
RNF43 ring finger protein 43
RPL9 ribosomal protein L9
SC5D sterol-C5-desaturase
SCD stearoyl-CoA desaturase (delta-9-desaturase)
SDPR serum deprivation response
SERPINB12 serpin peptidase inhibitor, clade B (ovalbumin), member 12
SGPP1 sphingosine-1-phosphate phosphatase 1
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC26A7 solute carrier family 26 (anion exchanger), member 7
SLC6A12 solute carrier family 6 (neurotransmitter transporter), member 12
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLURP1 secreted LY6/PLAUR domain containing 1
SNCG synuclein, gamma (breast cancer-specific protein 1)
SNORA65 small nucleolar RNA, H/ACA box 65
SNORA70 small nucleolar RNA, H/ACA box 70
SPRR2G small proline-rich protein 2G
SQLE squalene epoxidase
SREBF2 sterol regulatory element binding transcription factor 2
ST6GALNAC1 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1
STARD8 StAR-related lipid transfer (START) domain containing 8
TCAIM T cell activation inhibitor, mitochondrial
TCL1B T-cell leukemia/lymphoma 1B
TDGF1 teratocarcinoma-derived growth factor 1
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TEDDM1 transmembrane epididymal protein 1
THEG theg spermatid protein
THSD1 thrombospondin, type I, domain containing 1
TIE1 tyrosine kinase with immunoglobulin-like and EGF-like domains 1
TLX1NB TLX1 neighbor
TM4SF20 transmembrane 4 L six family member 20
TMEM100 transmembrane protein 100
TMEM170A transmembrane protein 170A
TMEM196 transmembrane protein 196
TMEM204 transmembrane protein 204
TMEM97 transmembrane protein 97
TOX3 TOX high mobility group box family member 3
TRIM51 tripartite motif-containing 51
TYR tyrosinase
ULK2 unc-51 like autophagy activating kinase 2
UNC13C unc-13 homolog C (C. elegans)
UNC93A unc-93 homolog A (C. elegans)
VWA5B2 von Willebrand factor A domain containing 5B2
VWC2 von Willebrand factor C domain containing 2
WBP2NL WBP2 N-terminal like
WFDC12 WAP four-disulfide core domain 12
WFDC5 WAP four-disulfide core domain 5
XIST X inactive specific transcript (non-protein coding)
ZFPM2 zinc finger protein, FOG family member 2
ZNF595 zinc finger protein 595
ZNF681 zinc finger protein 681
ZNF876P zinc finger protein 876, pseudogene

low expression

Symbol Name
FAM127C family with sequence similarity 127, member C