Brain Lower Grade Glioma_LGG_TCGA-DB-A4XE-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

141 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XE-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACR acrosin
AFF2 AF4/FMR2 family, member 2
APTX aprataxin
BCL11B B-cell CLL/lymphoma 11B (zinc finger protein)
BSPRY B-box and SPRY domain containing
C12ORF71 chromosome 12 open reading frame 71
C12ORF74 chromosome 12 open reading frame 74
C16ORF90 chromosome 16 open reading frame 90
C2ORF27A chromosome 2 open reading frame 27A
C3ORF30 chromosome 3 open reading frame 30
C7ORF13 chromosome 7 open reading frame 13
C8ORF31 chromosome 8 open reading frame 31
CCDC83 coiled-coil domain containing 83
CD244 CD244 molecule, natural killer cell receptor 2B4
CD82 CD82 molecule
CEP41 centrosomal protein 41kDa
CEP78 centrosomal protein 78kDa
CLIP2 CAP-GLY domain containing linker protein 2
CLLU1OS chronic lymphocytic leukemia up-regulated 1 opposite strand
COX19 COX19 cytochrome c oxidase assembly factor
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
CYP2W1 cytochrome P450, family 2, subfamily W, polypeptide 1
CYP4Z2P cytochrome P450, family 4, subfamily Z, polypeptide 2, pseudogene
DAB2IP DAB2 interacting protein
DCAF12L2 DDB1 and CUL4 associated factor 12-like 2
DEFB126 defensin, beta 126
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5
DOLPP1 dolichyldiphosphatase 1
DTX4 deltex 4, E3 ubiquitin ligase
DUXA double homeobox A
EEPD1 endonuclease/exonuclease/phosphatase family domain containing 1
EXOSC3 exosome component 3
FOXD4L5 forkhead box D4-like 5
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2
GALNTL5 polypeptide N-acetylgalactosaminyltransferase-like 5
GAPVD1 GTPase activating protein and VPS9 domains 1
GATS GATS, stromal antigen 3 opposite strand
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GP9 glycoprotein IX (platelet)
GPC2 glypican 2
GPR12 G protein-coupled receptor 12
GPR153 G protein-coupled receptor 153
GSTA1 glutathione S-transferase alpha 1
HAR1B highly accelerated region 1B (non-protein coding)
HAS2-AS1 HAS2 antisense RNA 1
IDI1 isopentenyl-diphosphate delta isomerase 1
IL9 interleukin 9
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KCNA10 potassium channel, voltage gated shaker related subfamily A, member 10
KCNJ14 potassium channel, inwardly rectifying subfamily J, member 14
KCNU1 potassium channel, subfamily U, member 1
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KCTD19 potassium channel tetramerization domain containing 19
KCTD7 potassium channel tetramerization domain containing 7
KIAA1161 KIAA1161
KIF21B kinesin family member 21B
KRT35 keratin 35, type I
KRT37 keratin 37, type I
KY kyphoscoliosis peptidase
LINC00051 long intergenic non-protein coding RNA 51
LINC00476 long intergenic non-protein coding RNA 476
LINC00482 long intergenic non-protein coding RNA 482
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LURAP1L leucine rich adaptor protein 1-like
MRGPRG-AS1 MRGPRG antisense RNA 1
NCBP1 nuclear cap binding protein subunit 1, 80kDa
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NKAPL NFKB activating protein-like
NPR2 natriuretic peptide receptor 2
NR1H4 nuclear receptor subfamily 1, group H, member 4
NUP210L nucleoporin 210kDa-like
NXPH1 neurexophilin 1
OR1F1 olfactory receptor, family 1, subfamily F, member 1
OR1M1 olfactory receptor, family 1, subfamily M, member 1
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR2M3 olfactory receptor, family 2, subfamily M, member 3
OR2T4 olfactory receptor, family 2, subfamily T, member 4
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OVCH1 ovochymase 1
PCDHA5 protocadherin alpha 5
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGA7 protocadherin gamma subfamily A, 7
PCDHGB3 protocadherin gamma subfamily B, 3
PDZRN4 PDZ domain containing ring finger 4
PLA2G12B phospholipase A2, group XIIB
PLD6 phospholipase D family, member 6
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
POTEB POTE ankyrin domain family, member B
POTED POTE ankyrin domain family, member D
PPBPP2 pro-platelet basic protein pseudogene 2
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D
PRH1 proline-rich protein HaeIII subfamily 1
PRRT4 proline-rich transmembrane protein 4
PRSS54 protease, serine, 54
PSAT1 phosphoserine aminotransferase 1
PSKH2 protein serine kinase H2
QSOX2 quiescin Q6 sulfhydryl oxidase 2
RAB14 RAB14, member RAS oncogene family
RNF20 ring finger protein 20, E3 ubiquitin protein ligase
RNF216P1 ring finger protein 216 pseudogene 1
RNF38 ring finger protein 38
RPA4 replication protein A4, 30kDa
RPRM reprimo, TP53 dependent G2 arrest mediator candidate
SCGB1C1 secretoglobin, family 1C, member 1
SECISBP2 SECIS binding protein 2
SLC22A6 solute carrier family 22 (organic anion transporter), member 6
SLFN11 schlafen family member 11
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
STMN2 stathmin 2
TARM1 T cell-interacting, activating receptor on myeloid cells 1
TAS2R8 taste receptor, type 2, member 8
TBC1D13 TBC1 domain family, member 13
TBPL2 TATA box binding protein like 2
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box)
TECRL trans-2,3-enoyl-CoA reductase-like
TFAMP1 transcription factor A, mitochondrial pseudogene 1
TMEM105 transmembrane protein 105
TMEM196 transmembrane protein 196
TMEM244 transmembrane protein 244
TMEM51-AS1 TMEM51 antisense RNA 1
TMEM52 transmembrane protein 52
TOR2A torsin family 2, member A
TRIM43 tripartite motif containing 43
TRIM58 tripartite motif containing 58
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
TTF1 transcription termination factor, RNA polymerase I
UBE2R2 ubiquitin-conjugating enzyme E2R 2
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
VCP valosin containing protein
WBP2NL WBP2 N-terminal like
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
ZBTB5 zinc finger and BTB domain containing 5
ZNF578 zinc finger protein 578
ZNF781 zinc finger protein 781
ZNF826P zinc finger protein 826, pseudogene

low expression

Symbol Name
ARMCX5 armadillo repeat containing, X-linked 5
TMCO6 transmembrane and coiled-coil domains 6