Brain Lower Grade Glioma_LGG_TCGA-DB-A4XD-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

215 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XD-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADACL4 arylacetamide deacetylase-like 4
ABCB5 ATP-binding cassette, sub-family B (MDR/TAP), member 5
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADGRB1 adhesion G protein-coupled receptor B1
AGBL1 ATP/GTP binding protein-like 1
AHCTF1 AT hook containing transcription factor 1
AHDC1 AT hook, DNA binding motif, containing 1
AKNA AT-hook transcription factor
ALOX15B arachidonate 15-lipoxygenase, type B
AMOTL1 angiomotin like 1
ARHGAP31 Rho GTPase activating protein 31
ARHGAP39 Rho GTPase activating protein 39
ARHGEF18 Rho/Rac guanine nucleotide exchange factor (GEF) 18
ASB15 ankyrin repeat and SOCS box containing 15
ASB3 ankyrin repeat and SOCS box containing 3
ATP13A4 ATPase type 13A4
BCR breakpoint cluster region
C3ORF20 chromosome 3 open reading frame 20
C7ORF13 chromosome 7 open reading frame 13
C7ORF60 chromosome 7 open reading frame 60
CACUL1 CDK2-associated, cullin domain 1
CAPN7 calpain 7
CASP9 caspase 9, apoptosis-related cysteine peptidase
CASZ1 castor zinc finger 1
CBR4 carbonyl reductase 4
CCDC105 coiled-coil domain containing 105
CCDC160 coiled-coil domain containing 160
CDH20 cadherin 20, type 2
CDH7 cadherin 7, type 2
CDON cell adhesion associated, oncogene regulated
CDYL chromodomain protein, Y-like
CEP83 centrosomal protein 83kDa
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CNKSR3 CNKSR family member 3
CPN1 carboxypeptidase N, polypeptide 1
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
DCAF12 DDB1 and CUL4 associated factor 12
DCAF8L1 DDB1 and CUL4 associated factor 8-like 1
DDIT4 DNA-damage-inducible transcript 4
DEFB132 defensin, beta 132
DENND4C DENN/MADD domain containing 4C
DPY19L4 dpy-19-like 4 (C. elegans)
EEF1DP3 eukaryotic translation elongation factor 1 delta pseudogene 3
EEF2 eukaryotic translation elongation factor 2
EPS15L1 epidermal growth factor receptor pathway substrate 15-like 1
ERC2-IT1 ERC2 intronic transcript 1
FAM136BP family with sequence similarity 136, member B, pseudogene
FAM160B1 family with sequence similarity 160, member B1
FAM69A family with sequence similarity 69, member A
FBXO31 F-box protein 31
FBXO42 F-box protein 42
FOLH1B folate hydrolase 1B
FOXO1 forkhead box O1
FOXO3 forkhead box O3
FRY furry homolog (Drosophila)
GCLC glutamate-cysteine ligase, catalytic subunit
GINS3 GINS complex subunit 3 (Psf3 homolog)
GPR153 G protein-coupled receptor 153
GPR161 G protein-coupled receptor 161
GPR32 G protein-coupled receptor 32
HTN1 histatin 1
IKZF2 IKAROS family zinc finger 2 (Helios)
INTS6 integrator complex subunit 6
IVNS1ABP influenza virus NS1A binding protein
JARID2 jumonji, AT rich interactive domain 2
KCND2 potassium channel, voltage gated Shal related subfamily D, member 2
KCTD3 potassium channel tetramerization domain containing 3
KDM4B lysine (K)-specific demethylase 4B
KDM7A lysine (K)-specific demethylase 7A
KIAA1211 KIAA1211
KIF1B kinesin family member 1B
KLHL28 kelch-like family member 28
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LGR5 leucine-rich repeat containing G protein-coupled receptor 5
LIFR leukemia inhibitory factor receptor alpha
LINC00593 long intergenic non-protein coding RNA 593
LOC100128573 uncharacterized LOC100128573
LRIG1 leucine-rich repeats and immunoglobulin-like domains 1
LRRC1 leucine rich repeat containing 1
LRRC19 leucine rich repeat containing 19
LURAP1L leucine rich adaptor protein 1-like
LUZP2 leucine zipper protein 2
MARCH5 membrane-associated ring finger (C3HC4) 5
MAT2A methionine adenosyltransferase II, alpha
MED26 mediator complex subunit 26
MEX3C mex-3 RNA binding family member C
MGC16142 uncharacterized protein MGC16142
MID1 midline 1
MIER3 mesoderm induction early response 1, family member 3
MKLN1 muskelin 1, intracellular mediator containing kelch motifs
MSTN myostatin
MTAP methylthioadenosine phosphorylase
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
MYOZ2 myozenin 2
NEDD4 neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase
NPVF neuropeptide VF precursor
NT5DC3 5'-nucleotidase domain containing 3
NUDT11 nudix (nucleoside diphosphate linked moiety X)-type motif 11
OGFRL1 opioid growth factor receptor-like 1
OPHN1 oligophrenin 1
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OSBPL11 oxysterol binding protein-like 11
PBOV1 prostate and breast cancer overexpressed 1
PCDHA4 protocadherin alpha 4
PCDHGA12 protocadherin gamma subfamily A, 12
PCDHGB8P protocadherin gamma subfamily B, 8 pseudogene
PCTP phosphatidylcholine transfer protein
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PMEL premelanosome protein
PNPLA8 patatin-like phospholipase domain containing 8
PPARA peroxisome proliferator-activated receptor alpha
PPBPP2 pro-platelet basic protein pseudogene 2
PPM1B protein phosphatase, Mg2+/Mn2+ dependent, 1B
PRSS35 protease, serine, 35
PRTG protogenin
PTCH1 patched 1
PTCHD2 patched domain containing 2
PTPRS protein tyrosine phosphatase, receptor type, S
QKI QKI, KH domain containing, RNA binding
RAB20 RAB20, member RAS oncogene family
RABGGTB Rab geranylgeranyltransferase, beta subunit
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RCOR1 REST corepressor 1
REPS1 RALBP1 associated Eps domain containing 1
RFX4 regulatory factor X, 4 (influences HLA class II expression)
RHOB ras homolog family member B
RNF150 ring finger protein 150
ROCK1 Rho-associated, coiled-coil containing protein kinase 1
RPL29P2 ribosomal protein L29 pseudogene 2
RSBN1 round spermatid basic protein 1
SAMD13 sterile alpha motif domain containing 13
SEBOX SEBOX homeobox
SESN1 sestrin 1
SGK3 serum/glucocorticoid regulated kinase family, member 3
SGMS1 sphingomyelin synthase 1
SH3RF1 SH3 domain containing ring finger 1
SIX1 SIX homeobox 1
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC39A14 solute carrier family 39 (zinc transporter), member 14
SLC9C1 solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
SMAD7 SMAD family member 7
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA16B small nucleolar RNA, H/ACA box 16B
SNORA9 small nucleolar RNA, H/ACA box 9
SNX16 sorting nexin 16
SOCS5 suppressor of cytokine signaling 5
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
ST3GAL6 ST3 beta-galactoside alpha-2,3-sialyltransferase 6
STK17B serine/threonine kinase 17b
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
TAS2R13 taste receptor, type 2, member 13
TAS2R38 taste receptor, type 2, member 38
TAS2R42 taste receptor, type 2, member 42
TBPL1 TBP-like 1
TET2 tet methylcytosine dioxygenase 2
TET3 tet methylcytosine dioxygenase 3
TEX30 testis expressed 30
TIGD2 tigger transposable element derived 2
TKTL2 transketolase-like 2
TLE1 transducin-like enhancer of split 1 (E(sp1) homolog, Drosophila)
TMCC1 transmembrane and coiled-coil domain family 1
TMEM100 transmembrane protein 100
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough
TPP2 tripeptidyl peptidase II
TRIM13 tripartite motif containing 13
TRIM32 tripartite motif containing 32
TRIM33 tripartite motif containing 33
TRIM62 tripartite motif containing 62
TYR tyrosinase
UBAP2 ubiquitin associated protein 2
UBIAD1 UbiA prenyltransferase domain containing 1
VCAN versican
VIPR2 vasoactive intestinal peptide receptor 2
VN1R1 vomeronasal 1 receptor 1
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
YAF2 YY1 associated factor 2
ZBTB16 zinc finger and BTB domain containing 16
ZBTB8A zinc finger and BTB domain containing 8A
ZC3H12C zinc finger CCCH-type containing 12C
ZFY zinc finger protein, Y-linked
ZNF100 zinc finger protein 100
ZNF112 zinc finger protein 112
ZNF14 zinc finger protein 14
ZNF154 zinc finger protein 154
ZNF175 zinc finger protein 175
ZNF189 zinc finger protein 189
ZNF222 zinc finger protein 222
ZNF254 zinc finger protein 254
ZNF264 zinc finger protein 264
ZNF286B zinc finger protein 286B
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF430 zinc finger protein 430
ZNF439 zinc finger protein 439
ZNF440 zinc finger protein 440
ZNF490 zinc finger protein 490
ZNF491 zinc finger protein 491
ZNF606 zinc finger protein 606
ZNF609 zinc finger protein 609
ZNF614 zinc finger protein 614
ZNF615 zinc finger protein 615
ZNF644 zinc finger protein 644
ZNF675 zinc finger protein 675
ZNF708 zinc finger protein 708
ZNF709 zinc finger protein 709
ZNF804A zinc finger protein 804A
ZNF844 zinc finger protein 844
ZNF91 zinc finger protein 91
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
CAND2 cullin-associated and neddylation-dissociated 2 (putative)
LOC388955 PRELI domain-containing protein 1, mitochondrial pseudogene
SNAPC5 small nuclear RNA activating complex, polypeptide 5, 19kDa