Brain Lower Grade Glioma_LGG_TCGA-DB-A4XB-01A-11R-A26U-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Brain Lower Grade Glioma_LGG (The Cancer Genome Atlas)
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Genes

254 genes with high or low expression in Brain Lower Grade Glioma_LGG_TCGA-DB-A4XB-01A-11R-A26U-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC6P1 ATP-binding cassette, sub-family C, member 6 pseudogene 1 (functional)
ADAM2 ADAM metallopeptidase domain 2
ADCY8 adenylate cyclase 8 (brain)
ADGRF3 adhesion G protein-coupled receptor F3
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide
AGO1 argonaute RISC catalytic component 1
ANGEL1 angel homolog 1 (Drosophila)
ANKRD27 ankyrin repeat domain 27 (VPS9 domain)
ANKRD33 ankyrin repeat domain 33
APPBP2 amyloid beta precursor protein (cytoplasmic tail) binding protein 2
ARID1B AT rich interactive domain 1B (SWI1-like)
ASCL3 achaete-scute family bHLH transcription factor 3
BAHCC1 BAH domain and coiled-coil containing 1
BCDIN3D BCDIN3 domain containing
BCL9 B-cell CLL/lymphoma 9
BCL9L B-cell CLL/lymphoma 9-like
BCORL1 BCL6 corepressor-like 1
BCORP1 BCL6 corepressor pseudogene 1
C10ORF113 chromosome 10 open reading frame 113
C17ORF70 chromosome 17 open reading frame 70
C7ORF13 chromosome 7 open reading frame 13
C8ORF31 chromosome 8 open reading frame 31
CALB2 calbindin 2
CANT1 calcium activated nucleotidase 1
CARD10 caspase recruitment domain family, member 10
CARD14 caspase recruitment domain family, member 14
CASP9 caspase 9, apoptosis-related cysteine peptidase
CBFA2T2 core-binding factor, runt domain, alpha subunit 2; translocated to, 2
CBR4 carbonyl reductase 4
CCDC142 coiled-coil domain containing 142
CCDC185 coiled-coil domain containing 185
CCDC85C coiled-coil domain containing 85C
CD200R1L CD200 receptor 1-like
CDON cell adhesion associated, oncogene regulated
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CHTF8 CTF8, chromosome transmission fidelity factor 8 homolog (S. cerevisiae)
CLDN6 claudin 6
CMTM1 CKLF-like MARVEL transmembrane domain containing 1
CNNM4 cyclin and CBS domain divalent metal cation transport mediator 4
COL22A1 collagen, type XXII, alpha 1
CRAMP1L Crm, cramped-like (Drosophila)
CSMD2 CUB and Sushi multiple domains 2
CSNK1D casein kinase 1, delta
CXADRP3 coxsackie virus and adenovirus receptor pseudogene 3
CXXC4 CXXC finger protein 4
CYB5RL cytochrome b5 reductase-like
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2
DCAF7 DDB1 and CUL4 associated factor 7
DCHS1 dachsous cadherin-related 1
DDX5 DEAD (Asp-Glu-Ala-Asp) box helicase 5
DHRS4L1 dehydrogenase/reductase (SDR family) member 4 like 1
DKFZP434L187 uncharacterized LOC26082
DLEU7 deleted in lymphocytic leukemia, 7
DLGAP1 discs, large (Drosophila) homolog-associated protein 1
DNASE1 deoxyribonuclease I
DOK4 docking protein 4
DPY19L4 dpy-19-like 4 (C. elegans)
DRGX dorsal root ganglia homeobox
DSC1 desmocollin 1
DSCAML1 Down syndrome cell adhesion molecule like 1
DTX4 deltex 4, E3 ubiquitin ligase
DZIP1 DAZ interacting zinc finger protein 1
EBF2 early B-cell factor 2
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EML1 echinoderm microtubule associated protein like 1
EYS eyes shut homolog (Drosophila)
FAM135B family with sequence similarity 135, member B
FAM83H family with sequence similarity 83, member H
FBXL4 F-box and leucine-rich repeat protein 4
FOXD3 forkhead box D3
FOXD4L3 forkhead box D4-like 3
FOXE1 forkhead box E1
FOXK2 forkhead box K2
FOXR1 forkhead box R1
FSCN3 fascin actin-bundling protein 3, testicular
FSHR follicle stimulating hormone receptor
GDNF glial cell derived neurotrophic factor
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3
GHSR growth hormone secretagogue receptor
GINS3 GINS complex subunit 3 (Psf3 homolog)
GJB7 gap junction protein, beta 7, 25kDa
GOLGA6D golgin A6 family, member D
GOPC golgi-associated PDZ and coiled-coil motif containing
GPBP1 GC-rich promoter binding protein 1
GPR119 G protein-coupled receptor 119
GPR153 G protein-coupled receptor 153
GPR45 G protein-coupled receptor 45
GRAMD1A GRAM domain containing 1A
GTF2A1L general transcription factor IIA, 1-like
H1F0 H1 histone family, member 0
H3F3C H3 histone, family 3C
HCFC1 host cell factor C1
HCG4 HLA complex group 4 (non-protein coding)
HID1 HID1 domain containing
HIST1H2AK histone cluster 1, H2ak
HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1
HTRA3 HtrA serine peptidase 3
HYAL3 hyaluronoglucosaminidase 3
IFITM4P interferon induced transmembrane protein 4 pseudogene
IGFBPL1 insulin-like growth factor binding protein-like 1
INO80 INO80 complex subunit
INPP5J inositol polyphosphate-5-phosphatase J
INTS8 integrator complex subunit 8
IRS1 insulin receptor substrate 1
JRK Jrk homolog (mouse)
KCNT2 potassium channel, sodium activated subfamily T, member 2
KCTD19 potassium channel tetramerization domain containing 19
KDM8 lysine (K)-specific demethylase 8
KLHDC2 kelch domain containing 2
KLK15 kallikrein-related peptidase 15
KRT74 keratin 74, type II
KRTAP1-1 keratin associated protein 1-1
KRTAP1-3 keratin associated protein 1-3
KRTAP4-9 keratin associated protein 4-9
KY kyphoscoliosis peptidase
LINC01550 long intergenic non-protein coding RNA 1550
LOC145783 uncharacterized LOC145783
LOC202181 SUMO-interacting motifs containing 1 pseudogene
LOC283332 uncharacterized LOC283332
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC400940 uncharacterized LOC400940
LOC647859 occludin pseudogene
LRFN1 leucine rich repeat and fibronectin type III domain containing 1
LRP12 low density lipoprotein receptor-related protein 12
LYPD6B LY6/PLAUR domain containing 6B
MAGEA10 melanoma antigen family A10
MAGEA9B melanoma antigen family A9B
MAST2 microtubule associated serine/threonine kinase 2
MCCD1 mitochondrial coiled-coil domain 1
MED13 mediator complex subunit 13
MFAP3 microfibrillar-associated protein 3
MGC57346 ADP-ribosylation factor pseudogene
MSTN myostatin
MTNR1A melatonin receptor 1A
NBPF1 neuroblastoma breakpoint family, member 1
NBPF9 neuroblastoma breakpoint family, member 9
NCKAP5 NCK-associated protein 5
NEUROD1 neuronal differentiation 1
NEUROD4 neuronal differentiation 4
NFIA nuclear factor I/A
NHLH1 nescient helix loop helix 1
NINL ninein-like
NOL11 nucleolar protein 11
NOMO3 NODAL modulator 3
NR2F1 nuclear receptor subfamily 2, group F, member 1
NSD1 nuclear receptor binding SET domain protein 1
NYNRIN NYN domain and retroviral integrase containing
OBP2A odorant binding protein 2A
OBP2B odorant binding protein 2B
OR13C5 olfactory receptor, family 13, subfamily C, member 5
OR52B2 olfactory receptor, family 52, subfamily B, member 2
OR52N4 olfactory receptor, family 52, subfamily N, member 4 (gene/pseudogene)
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OTUB2 OTU deubiquitinase, ubiquitin aldehyde binding 2
PCDHA13 protocadherin alpha 13
PCDHA6 protocadherin alpha 6
PDILT protein disulfide isomerase-like, testis expressed
PGS1 phosphatidylglycerophosphate synthase 1
PKNOX1 PBX/knotted 1 homeobox 1
POMT2 protein-O-mannosyltransferase 2
PPP1R26 protein phosphatase 1, regulatory subunit 26
PRR30 proline rich 30
PRSS54 protease, serine, 54
QRICH2 glutamine rich 2
RAET1K retinoic acid early transcript 1K pseudogene
RALGPS1 Ral GEF with PH domain and SH3 binding motif 1
RBM12B RNA binding motif protein 12B
RCOR2 REST corepressor 2
RFX7 regulatory factor X, 7
RGPD6 RANBP2-like and GRIP domain containing 6
RHBG Rh family, B glycoprotein (gene/pseudogene)
RND3 Rho family GTPase 3
RNF219 ring finger protein 219
RNF222 ring finger protein 222
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1
RPTOR regulatory associated protein of MTOR, complex 1
RUNX1T1 runt-related transcription factor 1; translocated to, 1 (cyclin D-related)
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SETD1B SET domain containing 1B
SGK223 homolog of rat pragma of Rnd2
SHF Src homology 2 domain containing F
SHROOM2 shroom family member 2
SIMC1 SUMO-interacting motifs containing 1
SLC22A20 solute carrier family 22, member 20
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC35D3 solute carrier family 35, member D3
SLC35E2 solute carrier family 35, member E2
SLC6A2 solute carrier family 6 (neurotransmitter transporter), member 2
SNCAIP synuclein, alpha interacting protein
SOGA1 suppressor of glucose, autophagy associated 1
SPEN spen family transcriptional repressor
SPERT spermatid associated
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene)
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2
STRIP1 striatin interacting protein 1
STX6 syntaxin 6
SYT2 synaptotagmin II
TAAR1 trace amine associated receptor 1
TAAR5 trace amine associated receptor 5
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
TAPT1 transmembrane anterior posterior transformation 1
TAS2R1 taste receptor, type 2, member 1
TAS2R3 taste receptor, type 2, member 3
TAS2R50 taste receptor, type 2, member 50
TAS2R9 taste receptor, type 2, member 9
TBX22 T-box 22
TCF20 transcription factor 20 (AR1)
TEX9 testis expressed 9
TFAMP1 transcription factor A, mitochondrial pseudogene 1
TLK2 tousled-like kinase 2
TMEM82 transmembrane protein 82
TPRXL tetra-peptide repeat homeobox-like
TRIM49 tripartite motif containing 49
TRIM53AP tripartite motif containing 53A, pseudogene
TRIM62 tripartite motif containing 62
TRIM64 tripartite motif containing 64
TRIQK triple QxxK/R motif containing
TSPY26P testis specific protein, Y-linked 26, pseudogene
TTC28 tetratricopeptide repeat domain 28
TTN titin
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
UBE2DNL ubiquitin-conjugating enzyme E2D N-terminal like (pseudogene)
UBE2O ubiquitin-conjugating enzyme E2O
UBQLN3 ubiquilin 3
UBR4 ubiquitin protein ligase E3 component n-recognin 4
UGT2A3 UDP glucuronosyltransferase 2 family, polypeptide A3
ULK4P2 ULK4 pseudogene 2
UNK unkempt family zinc finger
VEPH1 ventricular zone expressed PH domain-containing 1
XPO1 exportin 1
ZC3H3 zinc finger CCCH-type containing 3
ZDHHC8P1 zinc finger, DHHC-type containing 8 pseudogene 1
ZFAND4 zinc finger, AN1-type domain 4
ZFY zinc finger protein, Y-linked
ZHX2 zinc fingers and homeoboxes 2
ZNF202 zinc finger protein 202
ZNF251 zinc finger protein 251
ZNF252P zinc finger protein 252, pseudogene
ZNF318 zinc finger protein 318
ZNF500 zinc finger protein 500
ZNF623 zinc finger protein 623
ZNF696 zinc finger protein 696
ZNF804A zinc finger protein 804A
ZNF826P zinc finger protein 826, pseudogene
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
ATXN10 ataxin 10
GCSH glycine cleavage system protein H (aminomethyl carrier)
HDAC8 histone deacetylase 8
MRI1 methylthioribose-1-phosphate isomerase 1
NDUFB3 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 3, 12kDa
RNF115 ring finger protein 115
TMEM261 transmembrane protein 261