BFTC-909 Gene Set

Dataset COSMIC Cell Line Gene CNV Profiles
Category genomics
Type cell line
Description disease: carcinoma, transitional cell (Cell Line Ontology, CLO_0001949)
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Genes

72 genes with high or low copy number in BFTC-909 relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.

high copy number

Symbol Name Standardized Value
TREML4 triggering receptor expressed on myeloid cells-like 4 2.64759
TREM1 triggering receptor expressed on myeloid cells 1 2.64759
TREM2 triggering receptor expressed on myeloid cells 2 2.64759
ADCY10P1 adenylate cyclase 10 (soluble) pseudogene 1 2.64759
UNC5CL unc-5 homolog C (C. elegans)-like 2.64759
OARD1 O-acyl-ADP-ribose deacylase 1 2.64759
TREML5P triggering receptor expressed on myeloid cells-like 5, pseudogene 2.64759
APOBEC2 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2 2.64759
TREML3P triggering receptor expressed on myeloid cells-like 3, pseudogene 2.64759
TSPO2 translocator protein 2 2.64759
NFYA nuclear transcription factor Y, alpha 2.64759
TREML2 triggering receptor expressed on myeloid cells-like 2 2.64759
TREML1 triggering receptor expressed on myeloid cells-like 1 2.64759
MDFI MyoD family inhibitor 2.59653
TDRG1 testis development related 1 (non-protein coding) 2.59653
KCNK16 potassium channel, two pore domain subfamily K, member 16 2.59653
FRS3 fibroblast growth factor receptor substrate 3 2.59653
TOMM6 translocase of outer mitochondrial membrane 6 homolog (yeast) 2.59653
KCNK17 potassium channel, two pore domain subfamily K, member 17 2.59653
PRICKLE4 prickle homolog 4 (Drosophila) 2.59653
LRFN2 leucine rich repeat and fibronectin type III domain containing 2 2.59653
TFEB transcription factor EB 2.59653
FOXP4 forkhead box P4 2.59653
MIR4641 microRNA 4641 2.59653
NCR2 natural cytotoxicity triggering receptor 2 2.59653
LINC00951 long intergenic non-protein coding RNA 951 2.59653
PGC progastricsin (pepsinogen C) 2.59653
DAAM2 dishevelled associated activator of morphogenesis 2 2.49065
MOCS1 molybdenum cofactor synthesis 1 2.49065
BYSL bystin-like 2.49065
USP49 ubiquitin specific peptidase 49 2.49065
MED20 mediator complex subunit 20 2.49065
KIF6 kinesin family member 6 2.44392
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa 2.44392
CCND3 cyclin D3 2.44392
KDM4C lysine (K)-specific demethylase 4C 2.09628
DMRT3 doublesex and mab-3 related transcription factor 3 2.09314
DMRT2 doublesex and mab-3 related transcription factor 2 2.09294
GLIS3 GLIS family zinc finger 3 2.0925
GLIS3-AS1 GLIS3 antisense RNA 1 2.0925
MIR101-2 microRNA 101-2 2.09117
JAK2 Janus kinase 2 2.09117
INSL6 insulin-like 6 2.09117
GLDC glycine dehydrogenase (decarboxylating) 2.09117
KANK1 KN motif and ankyrin repeat domains 1 2.08887
RFX3 regulatory factor X, 3 (influences HLA class II expression) 2.08882
C9ORF66 chromosome 9 open reading frame 66 2.08877
DMRT1 doublesex and mab-3 related transcription factor 1 2.08877
CBWD1 COBW domain containing 1 2.08856
FOXD4 forkhead box D4 2.08839
PPAPDC2 phosphatidic acid phosphatase type 2 domain containing 2 2.08781
SPATA6L spermatogenesis associated 6-like 2.08781
RLN1 relaxin 1 2.08781
TPD52L3 tumor protein D52-like 3 2.08781
SLC1A1 solute carrier family 1 (neuronal/epithelial high affinity glutamate transporter, system Xag), member 1 2.08781
INSL4 insulin-like 4 (placenta) 2.08781
CDC37L1 cell division cycle 37-like 1 2.08781
AK3 adenylate kinase 3 2.08781
RCL1 RNA terminal phosphate cyclase-like 1 2.08781
RLN2 relaxin 2 2.08781
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase 2.08781
IL33 interleukin 33 2.08781
DOCK8 dedicator of cytokinesis 8 2.0845
PDCD1LG2 programmed cell death 1 ligand 2 2.08391
CD274 CD274 molecule 2.08391
RANBP6 RAN binding protein 6 2.08066
MIR4665 microRNA 4665 2.08066
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein 2.08066
ERMP1 endoplasmic reticulum metallopeptidase 1 2.07822
MLANA melan-A 2.07822
KIAA2026 KIAA2026 2.07822

low copy number

Symbol Name Standardized Value
MID1 midline 1 -2.84999