|HGNC Family||Non-coding RNAs|
|Name||colon cancer associated transcript 1 (non-protein coding)|
|Synonyms||onco-lncRNA-40, CARLO-5, CARLO5|
|NCBI Gene ID||100507056|
|Expression in Tissues and Cell Lines||
CCAT1 has 202 functional associations with biological entities spanning 3 categories (functional term, phrase or reference, cell line, cell type or tissue, gene, protein or microRNA) extracted from 5 datasets.
Click the + buttons to view associations for CCAT1 from the datasets below.
If available, associations are ranked by standardized value
|COSMIC Cell Line Gene CNV Profiles||cell lines with high or low copy number of CCAT1 gene relative to other cell lines from the COSMIC Cell Line Gene CNV Profiles dataset.|
|GeneRIF Biological Term Annotations||biological terms co-occuring with CCAT1 gene in literature-supported statements describing functions of genes from the GeneRIF Biological Term Annotations dataset.|
|GTEx Tissue Gene Expression Profiles||tissues with high or low expression of CCAT1 gene relative to other tissues from the GTEx Tissue Gene Expression Profiles dataset.|
|Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles||cell lines with high or low copy number of CCAT1 gene relative to other cell lines from the Klijn et al., Nat. Biotechnol., 2015 Cell Line Gene CNV Profiles dataset.|
|MotifMap Predicted Transcription Factor Targets||transcription factors regulating expression of CCAT1 gene predicted using known transcription factor binding site motifs from the MotifMap Predicted Transcription Factor Targets dataset.|