HPA Tissue Sample Gene Expression Profiles Dataset

Description mRNA expression profiles for tissue samples
Measurement gene expression by RNA-seq
Association gene-tissue sample associations by differential expression of gene across tissue samples
Category transcriptomics
Resource Human Protein Atlas
Citation(s)
Last Updated
Stats
  1. 16657 genes
  2. 121 tissue samples
  3. 303267 gene-tissue sample associations

Data Access

API
Script

Visualizations

  • Attribute Similarity

  • Dataset

  • Gene Similarity

tissue sample Gene Sets

121 sets of genes with high or low expression in each tissue sample relative to other tissue samples from the HPA Tissue Sample Gene Expression Profiles dataset.

Gene Set Description
adrenal_4a tissue sample derived from adrenal
adrenal_4c tissue sample derived from adrenal
adrenal_4d tissue sample derived from adrenal
appendices_4a tissue sample derived from appendices
appendices_4b tissue sample derived from appendices
appendices_4c tissue sample derived from appendices
bonemarrow_5a tissue sample derived from bonemarrow
bonemarrow_6a tissue sample derived from bonemarrow
bonemarrow_6b tissue sample derived from bonemarrow
bonemarrow_6c tissue sample derived from bonemarrow
brain_3b tissue sample derived from brain
brain_3c tissue sample derived from brain
brain_a tissue sample derived from brain
colonrectum_a tissue sample derived from colonrectum
colonrectum_b tissue sample derived from colonrectum
colonrectum_c tissue sample derived from colonrectum
colonrectum_d tissue sample derived from colonrectum
colonrectum_f tissue sample derived from colonrectum
colon_8a tissue sample derived from colon
colon_8b tissue sample derived from colon
duodenum_4b tissue sample derived from duodenum
duodenum_4c tissue sample derived from duodenum
endometrium_4a tissue sample derived from endometrium
endometrium_4b tissue sample derived from endometrium
endometrium_5a tissue sample derived from endometrium
endometrium_8a tissue sample derived from endometrium
endometrium_8b tissue sample derived from endometrium
esophagus_5a tissue sample derived from esophagus
esophagus_5b tissue sample derived from esophagus
esophagus_5c tissue sample derived from esophagus
fallopiantube_5a tissue sample derived from fallopiantube
fallopiantube_8b tissue sample derived from fallopiantube
fallopiantube_8c tissue sample derived from fallopiantube
fallopiantube_8d tissue sample derived from fallopiantube
fallopiantube_8e tissue sample derived from fallopiantube
fat_8a tissue sample derived from fat
fat_8b tissue sample derived from fat
fat_a.V1 tissue sample derived from fat
fat_e tissue sample derived from fat
fat_x1.V2 tissue sample derived from fat
gallbladder_5a tissue sample derived from gallbladder
gallbladder_5b tissue sample derived from gallbladder
gallbladder_5c tissue sample derived from gallbladder
heart_5a tissue sample derived from heart
heart_5b tissue sample derived from heart
heart_6a tissue sample derived from heart
heart_6b tissue sample derived from heart
kidney_a tissue sample derived from kidney
kidney_b tissue sample derived from kidney
kidney_c tissue sample derived from kidney
kidney_d tissue sample derived from kidney
liver_a tissue sample derived from liver
liver_c tissue sample derived from liver
liver_d tissue sample derived from liver
lung_3e tissue sample derived from lung
lung_3f tissue sample derived from lung
lung_4a tissue sample derived from lung
lung_4b tissue sample derived from lung
lung_4d tissue sample derived from lung
lymphnode_4a tissue sample derived from lymphnode
lymphnode_4b tissue sample derived from lymphnode
lymphnode_5a tissue sample derived from lymphnode
lymphnode_5b tissue sample derived from lymphnode
lymphnode_5c tissue sample derived from lymphnode
ovary_6a tissue sample derived from ovary
ovary_6b tissue sample derived from ovary
ovary_8a tissue sample derived from ovary
pancreas_6a tissue sample derived from pancreas
pancreas_6b tissue sample derived from pancreas
placenta_3a tissue sample derived from placenta
placenta_6a tissue sample derived from placenta
placenta_6b tissue sample derived from placenta
placenta_6c tissue sample derived from placenta
prostate_4a tissue sample derived from prostate
prostate_4b tissue sample derived from prostate
prostate_4c tissue sample derived from prostate
prostate_a tissue sample derived from prostate
rectum_8a tissue sample derived from rectum
rectum_8b tissue sample derived from rectum
rectum_8c tissue sample derived from rectum
rectum_8d tissue sample derived from rectum
salivarygland_6a tissue sample derived from salivarygland
salivarygland_6b tissue sample derived from salivarygland
salivarygland_6c tissue sample derived from salivarygland
skeletalmuscle_a tissue sample derived from skeletalmuscle
skeletalmuscle_b tissue sample derived from skeletalmuscle
skeletalmuscle_c tissue sample derived from skeletalmuscle
skeletalmuscle_d tissue sample derived from skeletalmuscle
skeletalmuscle_e tissue sample derived from skeletalmuscle
skin_5e tissue sample derived from skin
skin_5f tissue sample derived from skin
skin_6a tissue sample derived from skin
smallintestine_4a tissue sample derived from smallintestine
smallintestine_4b tissue sample derived from smallintestine
smallintestine_4c tissue sample derived from smallintestine
smallintestine_4d tissue sample derived from smallintestine
smoothmuscle_8a tissue sample derived from smoothmuscle
smoothmuscle_8b tissue sample derived from smoothmuscle
smoothmuscle_8c tissue sample derived from smoothmuscle
spleen_3a tissue sample derived from spleen
spleen_3b tissue sample derived from spleen
spleen_3c tissue sample derived from spleen
spleen_3d tissue sample derived from spleen
stomach_3a tissue sample derived from stomach
stomach_3b tissue sample derived from stomach
stomach_a tissue sample derived from stomach
testis_4a tissue sample derived from testis
testis_7a tissue sample derived from testis
testis_7b tissue sample derived from testis
testis_7d tissue sample derived from testis
testis_7e tissue sample derived from testis
testis_7f tissue sample derived from testis
thyroid_5a tissue sample derived from thyroid
thyroid_5b tissue sample derived from thyroid
thyroid_5c tissue sample derived from thyroid
thyroid_5d tissue sample derived from thyroid
tonsil_8a1 tissue sample derived from tonsil
tonsil_8b1 tissue sample derived from tonsil
tonsil_8e1 tissue sample derived from tonsil
urinarybladder_5b tissue sample derived from urinarybladder
urinarybladder_5c tissue sample derived from urinarybladder